Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1290 ATGGAGTCCAGTGACGCTAACACTTCTACTTCGTCTCCACTTCCTCTGTCTCAGTCTCCGACCAATTCGTCGTCGTCTCCGCCGCAAGTCGTGGCGAGTCCCTGTGCCGCTTGTAAGATTCTTAGACGCCGGTGCGCCGAGAAATGCGTCTTGGCGCCGTATTTCCCTCCCACCGATCCGGCCAAGTTCACCATCGCCCACCGTGTCTTCGGCGCCAGCAACATCATCAAGTTCTTGCAGGAACTGCCAGAGTGCCAAAGAGCCGACGCCGTGAGTAGTATGGTGTACGAGGCTAGCGCGAGAATAAGAGACCCAATATATGGGTGTGCGGGTGCGATTTGCCAGCTTCAAAAGCAAGTGGGCGAGCTTCAGGGTCAGCTAGCCAAGGCTCAAGCCGAGCTCGTCACCATGCAGCTCCAGCAAGCCAACCTGGTGGCTCTCATTTGCATGGAAATGTCCACACCAACCGTCATTACTCCTCGCGAATCTCAATCGCCACAACAGTCTTTTGACGATTTCATCTCTACTCCTCCCCACACCACTAACCTCAACTTCTTCGACGACAACACAAGCTTTAATCCACTGTGGGAGCCTCTTTGGACATGA 606 0.5446 MESSDANTSTSSPLPLSQSPTNSSSSPPQVVASPCAACKILRRRCAEKCVLAPYFPPTDPAKFTIAHRVFGASNIIKFLQELPECQRADAVSSMVYEASARIRDPIYGCAGAICQLQKQVGELQGQLAKAQAELVTMQLQQANLVALICMEMSTPTVITPRESQSPQQSFDDFISTPPHTTNLNFFDDNTSFNPLWEPLWT 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1290 201 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 32 159 - -
Bisa12g1290 201 Coils Coil 120 140 - -
Bisa12g1290 201 Pfam Lateral organ boundaries (LOB) domain 34 131 IPR004883 -
Bisa12g1290 201 ProSiteProfiles LOB domain profile. 33 134 IPR004883 -
Bisa12g1290 201 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1290 Bisa-ChrBisa12 22082066 22083054 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1290 30 201 AS2 family AT2G28500 64.835 4.62e-77 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa12g1290 LOB 5.6e-40 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1290 12 22082066 22083054 Bisa02g3735 02 90603970 90605356 CCT
Bisa12g1290 12 22082066 22083054 Bisa12g1290 12 22082066 22083054 ECH