Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1271 ATGGAGGGAGATCAACTGGGCTCTAAGTTTCCTCCTGGTTTCAGATTCCATCCATCTGATGAAGAACTCATAGTTCATTACTTGCAGAATAAAATCACATCACGTCCACTTCCAGCTTTGATCATTGCTGACATTGATCTGTACAAGTATAGCCCATGGGAGCTACCCAAGAAGGCTTTGTTTGGGGAGGATGAGTGATTAGTAGACTCTACCACCAGACCCTCCAAGTTCAAGGGCTCCATGCGTTTGGATGACTGGGTACTGTGTCGGGTTCGACATAAAGGAGACTCATTTAAGAATTCTTGGGAGAACCAAGAGAAGAACTGTAGACCAAATTTGCAGGCAAATCCACCAAGGTGTGAGGAATACCCAACAAAGACAAACCTGGAAGCTAACTTGGTCACAGATTATCAAAGCAAAGACTGTCTAATCTTAGCCTCCACTCTAGTTCGAGATCCTGTACTTCCCATTGAGAACATGTCAAGTGTGAGCTTCAAAGATAGCAAAGGCGACAACCTTAATTCAGTGTACGAAGAAAAAGGATCCAACAAAGTGAATTCTCATGTGGCAATTCCTTCATTGTTCAGCTATTTTGACCTGCTAAACAAAAAATCTGACGAGGACAATCAATACGGAAATCTCATTTCTTTTAGCAGCAAGCTAAACACTGAGAACAAAGTAGATAATTTTACCAGCAAGGCGATGAACAATAGTGACATGAACTGCTATGACCAAAATCAGTGTCAAGATGACATCCTCAGTGGGAGCCCCCTACCTGATCCCACCATCAATTTCGAAGAACTAAACAGATTGTCCTTCACAGGAAGATACCTACAATGA 840 0.4238 MEGDQLGSKFPPGFRFHPSDEELIVHYLQNKITSRPLPALIIADIDLYKYSPWELPKKALFGEDEXLVDSTTRPSKFKGSMRLDDWVLCRVRHKGDSFKNSWENQEKNCRPNLQANPPRCEEYPTKTNLEANLVTDYQSKDCLILASTLVRDPVLPIENMSSVSFKDSKGDNLNSVYEEKGSNKVNSHVAIPSLFSYFDLLNKKSDEDNQYGNLISFSSKLNTENKVDNFTSKAMNNSDMNCYDQNQCQDDILSGSPLPDPTINFEELNRLSFTGRYLQ 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1271 279 Gene3D NAC domain 19 73 IPR036093 GO:0003677|GO:0006355
Bisa12g1271 279 ProSiteProfiles NAC domain profile. 10 151 IPR003441 GO:0003677|GO:0006355
Bisa12g1271 279 SUPERFAMILY NAC domain 9 94 IPR036093 GO:0003677|GO:0006355
Bisa12g1271 279 PANTHER NAC TRANSCRIPTION FACTOR 56 10 65 - -
Bisa12g1271 279 Pfam No apical meristem (NAM) protein 11 68 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1271 Bisa-ChrBisa12 21692686 21694625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1271 10 65 NAC Transcription Factor Family AT1G61110 71.429 3.26e-22 92.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa12g1271 NAM 2.7e-14 No_clan