Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1260 ATGGCTTCTTTCAGGAAGTCGAAGGCTGAAAAGCAAAGCAACAATGGAGAAAGCTCAGAAACGGCGAGTAAAGCCAGTAAACCCAGAAAAGAGGACTTAAAGAAGAAGAAGAAGAAGAAGGTAGTGGAGAAGAACAAGAACAAACTCAGCAATAGCAATGTGAAGAAGGACGATAAGACGAAGAAAAAGGAGGCCGTGGTGGTGGTGGAGAAGAAGAACAAGAACAAGTACAGCAATGGCAATGTGAAGAAGTACGGTAAACTGTTGATTGTCCCGTCTTCCAGCGCCGAGTCCCTAGAAGAAGCTCAGAAAGGGCATGGAATAGACAACGGTGGGATCGCAAACGGGCGAACCAGCGGAACGAAACCCAAGAAAGGGAAACGAAAGCAACAGATTGACGGATATGAAGCTGAAGAGAAAGCAGATGCGAAAACAGATAAATTTCCGATGAGTCGCATCAGGAAAATAATGACGGCCGAAGATCCCAATTTACGAGTTTCTGAGGAAGCCATCTTGGTCATCAGCAAAGCTACGGTGAAGTTCCTTGAACAATTGACCCGGGAAGCTTGTGCTTGTGCTGTTCAGGATCGAAAGAAACTTCTTGGTTACCAGCGCCTATCATATGTTGTTAACAAGCAAAGGAGATATGAATTTCTTTTAGATTATGTTCCTGAGAAACTAAAAGCTGAGGATGCATTAAGGGAGAGAAATTTATGCAGAGACTGGGAAGGTCCGAAAACAGCTCCAAAGCATGCTGCAAGTGTTGCTGTCTCAAGCAAATTCATACCTGAACCTCCTGAACACCATTTTTTAACGTCAGGAAGTACAGAAGTTTGTAACATAATCTATGTTAGTTAG 858 0.4359 MASFRKSKAEKQSNNGESSETASKASKPRKEDLKKKKKKKVVEKNKNKLSNSNVKKDDKTKKKEAVVVVEKKNKNKYSNGNVKKYGKLLIVPSSSAESLEEAQKGHGIDNGGIANGRTSGTKPKKGKRKQQIDGYEAEEKADAKTDKFPMSRIRKIMTAEDPNLRVSEEAILVISKATVKFLEQLTREACACAVQDRKKLLGYQRLSYVVNKQRRYEFLLDYVPEKLKAEDALRERNLCRDWEGPKTAPKHAASVAVSSKFIPEPPEHHFLTSGSTEVCNIIYVS 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1260 285 Gene3D Histone, subunit A 117 225 IPR009072 GO:0046982
Bisa12g1260 285 MobiDBLite consensus disorder prediction 45 71 - -
Bisa12g1260 285 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 128 238 - -
Bisa12g1260 285 MobiDBLite consensus disorder prediction 1 79 - -
Bisa12g1260 285 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 147 207 IPR003958 -
Bisa12g1260 285 MobiDBLite consensus disorder prediction 1 22 - -
Bisa12g1260 285 MobiDBLite consensus disorder prediction 100 143 - -
Bisa12g1260 285 SUPERFAMILY Histone-fold 136 225 IPR009072 GO:0046982
Bisa12g1260 285 MobiDBLite consensus disorder prediction 126 143 - -
Bisa12g1260 285 MobiDBLite consensus disorder prediction 30 44 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1260 Bisa-ChrBisa12 21594080 21598081 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1260 100 206 CCAAT-HAP5 Transcription Factor Family AT1G07980 36.449 4.78e-14 67.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa12g1260 CBFD_NFYB_HMF 4.8e-11 CL0012