Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1258 ATGATGCCCACGCTGTTGATTCGTGTTGGTGGATTTAGGCTTTTGGAGTTGATTGACAGGGTTTTTCTAGCTTGTCTTTCTCGCCCAAAAAAAAAAAGGTCAACGAATTCATGTTTGCACTACGGCCGAGTACAATCTTATTTTGTGTGTAATGCAATCCCCGAAATCCAATTTAGCTTTCATCTACTTGATGGGACTCTTGATGTGAAAATCATAACAGGGTCGGCAGAGAACATAGTTATTAGATATTCAATTAACAGTTTTTCCAGTCGAGAGTACATCAACGGTTTTAAGTTCAAGTTCCAGATGTTGAATAAGAGTTTTACTTTAGCCAAATCAATTGGCTGTTGTAGTTGCTTCGGGTTCATCAGAAAAAATAAACGCCAGAGTGCTAAGCTTGGCATCAATAACAATCTCTCTCAGGAGCCATTGTTAGACGCAGACATTGAAGACGATGATGACTCATTTAAAAGTGAGGTTACTAACACCTCCAGTGGAGATGATAGTGATGTGCAAGTTCGTGCCAGACGATCTGAGGATATTTTGAAATTGAGAGAAGAGAATGGCATGATTTGTAGGCAGTTTCCTGTTAAGGAAACTCACAAAGTTGTTCGCAGTGAGGATGAAAATGGGAACAGGATGATAAATGAGTATGTTCGTGAATACAGGATTGGTTCTGGTAGCTACGGGAAAGTGGTTCTTTATCGAAATGCTATAGATGGAAAGAATTATGCAATTAAGGTAAGGTACAACTGGTCAATTATTGAGATTGAATTTTGTGAACTGCAGGCCTTTCATAAGTCCCATTTACTAAAGCTTCGAGTTTCACCCTCAGAGACTGCCATGACTGATGTTCTGCGTGAGGTACTCATTATGAAAATGCTGCAACACCCTAATATAGTCAATCTCGTTGAAGTGATTGATGATCCAGAATCGGATCACTTTTACATGGTACTTGAATATGTGGAAGACAAATGGGTTTGTGAGGGTTCAGGACGACACTGTGCCTTAGGTGAAGAGACTGCTCGGAAATACTTGCGTGATATAGTTTCGGGATTAATGTATCTTCATGCTCATAATATTGTGCATGGGGATATTAAACCTGATAATCTATTGGTTACTCACAATGGTACAGTAAAGATAGGGGATTTCAGCGTCAGCCAGGCATTTGAGGATGATAATGATGAGCTTCGTCGATCACCAGGCACTCCTGTGTTCACTGCACCAGAATGTTGTTTGGGTCTTACCTATCATGGTAAAGCTGCAGACACATGGGCAGTAGGAGTCACTTTGTACTGTATGATACTGGGTGAATACCCATTTCTGGGAGATACACTTCAAGATACCTATGACAAAATAGTCAATAATCCTTTAGTACTCCCGGATGATTTAAACCCGCAGTTAAAGAACTTGATAGAAGGACTACTTTGCAAAGATCCAAAACAAAGGATGACATTGGGTGATGTTGCGGAGCATAGCTGGGTTATAGGAGATGATGGGCCAATTCCTGAGTACTTGTGCTGGTGTAAACGCCAGAGCTTCGAGAGGGAAGACTTTGACAGGACCGATATACTTGCTTGA 1581 0.4086 MMPTLLIRVGGFRLLELIDRVFLACLSRPKKKRSTNSCLHYGRVQSYFVCNAIPEIQFSFHLLDGTLDVKIITGSAENIVIRYSINSFSSREYINGFKFKFQMLNKSFTLAKSIGCCSCFGFIRKNKRQSAKLGINNNLSQEPLLDADIEDDDDSFKSEVTNTSSGDDSDVQVRARRSEDILKLREENGMICRQFPVKETHKVVRSEDENGNRMINEYVREYRIGSGSYGKVVLYRNAIDGKNYAIKVRYNWSIIEIEFCELQAFHKSHLLKLRVSPSETAMTDVLREVLIMKMLQHPNIVNLVEVIDDPESDHFYMVLEYVEDKWVCEGSGRHCALGEETARKYLRDIVSGLMYLHAHNIVHGDIKPDNLLVTHNGTVKIGDFSVSQAFEDDNDELRRSPGTPVFTAPECCLGLTYHGKAADTWAVGVTLYCMILGEYPFLGDTLQDTYDKIVNNPLVLPDDLNPQLKNLIEGLLCKDPKQRMTLGDVAEHSWVIGDDGPIPEYLCWCKRQSFEREDFDRTDILA 526
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1258 526 ProSiteProfiles Protein kinase domain profile. 218 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1258 526 PANTHER MAP/MICROTUBULE AFFINITY-REGULATING KINASE 171 497 - -
Bisa12g1258 526 FunFam Serine/threonine-protein kinase GRIK2 208 524 - -
Bisa12g1258 526 Pfam Protein kinase domain 218 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1258 526 SMART serkin_6 218 495 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1258 526 ProSitePatterns Protein kinases ATP-binding region signature. 224 247 IPR017441 GO:0005524
Bisa12g1258 526 SUPERFAMILY Protein kinase-like (PK-like) 213 517 IPR011009 -
Bisa12g1258 526 CDD STKc_LKB1_CaMKK 224 495 - -
Bisa12g1258 526 Gene3D Transferase(Phosphotransferase) domain 1 208 518 - -
Bisa12g1258 526 ProSitePatterns Serine/Threonine protein kinases active-site signature. 361 373 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1258 Bisa-ChrBisa12 21558564 21567526 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1258 213 494 CBL-interacting serine-threonine protein kinases AT5G35410 32.624 2.27e-41 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-LKB Bisa12g1258 Pkinase 2.4e-54 CL0016