Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1243 ATGGCCATGGCTGTGGCTCAACACAGAGAAAACAGCAGCGGGAGTATTGATAAGCACCTTGATTCCGGGAAATATGTACGATACACGGCTGAGCAGGTTGAAGCCCTCGAACGGGTTTATACTGAGTGCCCCAAGCCCAGCTCCTTGCGAAGGCAGCAATTGGTCCGAGAGTGTGCCATTCTTGCCAACATCGAGCCCAAGCAAATCAAAGTTTGGTTCCAGAATCGTAGGTGTAGAGAGAAGCAGAGAAAAGAGTCTTCCCGGCTTCAGGCTGTTAACCGGAAACTCACATCGATGAACAAGTTGTTGATGGAGGAAAATGATCGGTTGCAGAGACAGGTGTCACAACTCGTAAACGAGAACGGATTTATGCGGCAGCAATTGCAAACACCATCAGCAGCAACTACTGATGGCAGTTGTGATTCAGTTGTTACTACTACTCAGCATTCCATAAGAGATGCTAATAATCCTGCTGGACTCTTATCAATCGCGGAGGAGACCTTGGCAGAGTTCCTTTCAAAGGCTACGGGAACTGCTGTCGATTGGGTCCAGATGCCTGGGATGAAGCCTGGTCCGGATTCGGTTGGGATCTTTGCCATCTCACAAAGTTGTAGTGGAGTGGCAGCTCGAGCCTGCGGTCTTGTTAGTTTGGAACCAACAAAGATTGCAGAGATCCTAAAAGATCGTCCATCTTGGTTTCGGGATTGCCGGAGCCTTGAAGTTTTCACAATGTTCCCTGCTGGGAATGGAGGAACTATTGAACTTGTCTACACACAGACATATGCTCCAACAACACTTGCTCCTGCCCGGGATTTTTGGACTCTTAGATATACTACAACCTTGGACAACGGCAGTCTCCTGGTTTGTGAAAGGTCATTGTCTGGTTCTGGAGCCAGCCCTAATGCAGCTGCTGCCACTCAATTTGCCAGAGCTGAAATGCTCCCTAGTGGCTACTTGATTCGACCATGTGAAGGTGGAGGATCAATCATCCACATTGTAGACCACCTAAATCTCGAGGCTTGGAGTGTGCCAGAGGTGCTGCGACCGCTTTATCAATCATCAAAAATGGTGGCTCAGAAAATGACAATTGCTGCACTTCGCTACATCAGGCAAATAGCTCAGGAAACTAGTGGTGAAGTGGTATATGGTTTGGGTAGGCAACCTGCTGTTCTGCGAACATTCAGCCAAAGAATGAGCAGAGGCTTCAATGATGCTGTAAATGGATTCAATGACGATGGGTGGTCTGTACTGAACTGTGATGGTGCTGAGGACGTAATTATTGCAGTTAATTCAACGAAGAATTTGAGTGGCACTACTAATCCAGCAAGTTCACTGACATTCCTTGGAGGAATTCTTTGTGCAAAGGCTTCCATGTTGCTTCAAAATGTCCCCCCTGCTGTTTTGGTTCGCTTTCTGAGAGAGCACCGCTCAGAGTGGGCTGACTTCAATGTTGATGCCTATTCTGCTGCATCACTGAAAGCTGGCTCTTATGCCTATCCTGGAATGAGGCCTACAAGGTTCACTGGCAGTCAAATCATCATGCCTCTCGGCCACACAATTGAACAGGAAGAGATGCTTGAAGTTATTCGGCTCGAAGGCCACTCTGTTGCTCAGGAGGATGCCTTTGTTTCCAGGGACATTCATCTCCTACAGATATGTAGTGGAATTGATGAGAATGCTGTGGGAGCTTGTTCTGAGCTCATATTTGCTCCTATTGATGAAATGTTCCCAGATGATGCTCCATTGGTACCTTCTGGTTTCCGTATCATCCCATTGGATTCAAAACCAGGTGATAAGAAAGATGCAATGACTACAAATCGGACCCTGGATTTGACATCTGGTCTTGAAGTGGGTCCAGCAATGAATCATACTGCAGATGAATCATGTCATAACACTCGATCAGTGTTGACGATTGCCTTCCAATTTCCTTTTGACAGCAATTTGCAGGACAATGTTGCAATTATGGCACGCCAGTATGTTCGTAGTGTGATAACCTCAGTGCAGAGGGTTGCAATTGCAATATCTCCATCTGGTATAACCCCTGCAGTTGGGCCAAAATTGTCTCCTGGATCTCCTGAAGCTCTTACATTAGCTCAATGGATATGTCAGAGTTATAGTTACTACTTGGGGACGGAATTACTGAGACCTGATTCTGTTGCTGGTGACTCGCTATTGAAACATCTTTGGCATCATCCAGATGCTATCCTGTGCTGTTCATTAAAGTCGTTGCCAGTGTTCATCTTTGCAAACCAGGCAGGGCTTGACATGCTGGAAACAACTTTAGTGGCTTTACAAGACGTCTTATTGGATAGAATATTTGATGAGTCTGGACGCAAAGCATTGTGCTCAGACTTTCCGAAGTTAATGCAGCAGGGGTTTGCCTATCTACCAGCTGGGATCTGCATGTCCACGATGGGGCGCCATGTTTCATTTGACCAAGCCATCGCTTGGAAAGTGCTTGCTGCAGAAAATAATAATACTGTTCATTGTTTGGCTTTCTCTTTCGTAAATTGGTCGTTCGTATGA 2526 0.464 MAMAVAQHRENSSGSIDKHLDSGKYVRYTAEQVEALERVYTECPKPSSLRRQQLVRECAILANIEPKQIKVWFQNRRCREKQRKESSRLQAVNRKLTSMNKLLMEENDRLQRQVSQLVNENGFMRQQLQTPSAATTDGSCDSVVTTTQHSIRDANNPAGLLSIAEETLAEFLSKATGTAVDWVQMPGMKPGPDSVGIFAISQSCSGVAARACGLVSLEPTKIAEILKDRPSWFRDCRSLEVFTMFPAGNGGTIELVYTQTYAPTTLAPARDFWTLRYTTTLDNGSLLVCERSLSGSGASPNAAAATQFARAEMLPSGYLIRPCEGGGSIIHIVDHLNLEAWSVPEVLRPLYQSSKMVAQKMTIAALRYIRQIAQETSGEVVYGLGRQPAVLRTFSQRMSRGFNDAVNGFNDDGWSVLNCDGAEDVIIAVNSTKNLSGTTNPASSLTFLGGILCAKASMLLQNVPPAVLVRFLREHRSEWADFNVDAYSAASLKAGSYAYPGMRPTRFTGSQIIMPLGHTIEQEEMLEVIRLEGHSVAQEDAFVSRDIHLLQICSGIDENAVGACSELIFAPIDEMFPDDAPLVPSGFRIIPLDSKPGDKKDAMTTNRTLDLTSGLEVGPAMNHTADESCHNTRSVLTIAFQFPFDSNLQDNVAIMARQYVRSVITSVQRVAIAISPSGITPAVGPKLSPGSPEALTLAQWICQSYSYYLGTELLRPDSVAGDSLLKHLWHHPDAILCCSLKSLPVFIFANQAGLDMLETTLVALQDVLLDRIFDESGRKALCSDFPKLMQQGFAYLPAGICMSTMGRHVSFDQAIAWKVLAAENNNTVHCLAFSFVNWSFV 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1243 841 CDD bZIP 76 115 - -
Bisa12g1243 841 ProSiteProfiles START domain profile. 153 381 IPR002913 GO:0008289
Bisa12g1243 841 Gene3D - 197 379 IPR023393 -
Bisa12g1243 841 SUPERFAMILY Bet v1-like 162 374 - -
Bisa12g1243 841 Gene3D - 17 90 - -
Bisa12g1243 841 ProSiteProfiles 'Homeobox' domain profile. 19 83 IPR001356 GO:0003677
Bisa12g1243 841 SMART START_1 162 372 IPR002913 GO:0008289
Bisa12g1243 841 Coils Coil 89 127 - -
Bisa12g1243 841 SMART HOX_1 21 87 IPR001356 GO:0003677
Bisa12g1243 841 Pfam MEKHLA domain 696 840 IPR013978 -
Bisa12g1243 841 Pfam START domain 163 370 IPR002913 GO:0008289
Bisa12g1243 841 SUPERFAMILY Homeodomain-like 23 85 IPR009057 -
Bisa12g1243 841 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 20 841 IPR044830 GO:0003700
Bisa12g1243 841 CDD homeodomain 24 84 IPR001356 GO:0003677
Bisa12g1243 841 Pfam Homeodomain 24 82 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1243 Bisa-ChrBisa12 21286459 21292622 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1243 1 841 Homeobox Transcription Factor Family AT5G60690 81.958 0.0 1450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa12g1243 START 1.1e-46 CL0209