Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1241 ATGGATGATGGTTGCCAACATGAAAACAGTAGACAAAAGATGGACTACTACAGAGGAACACATTCCTCAGTAAAGGAACCAAATGCCCTGGTTATGAATAAGAAAATTATGTCCATTATGGCTAAGAGGGAGACTGCCATTAGAGAAAGAAATGCAGCTTTATCTGAAAAGAACGAAGCCTTGGCTGCTCGAGATGAGGCCCTTCAGCAAAGGGATGAAGCATTTCTTCAGAGGGACAATGCCTTAATGGAACATGATAATGCCCTTGTTGCCCTTTGA 279 0.4229 MDDGCQHENSRQKMDYYRGTHSSVKEPNALVMNKKIMSIMAKRETAIRERNAALSEKNEALAARDEALQQRDEAFLQRDNALMEHDNALVAL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1241 92 MobiDBLite consensus disorder prediction 1 20 - -
Bisa12g1241 92 PANTHER - 1 92 IPR010409 -
Bisa12g1241 92 Pfam GAGA binding protein-like family 1 86 IPR010409 -
Bisa12g1241 92 Coils Coil 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1241 Bisa-ChrBisa12 21237940 21238373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1241 1 92 BBR or BPC Transcription factor family AT4G38910 56.701 1.75e-30 107
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BBR-BPC Bisa12g1241 GAGA_bind 1.7e-10 No_clan