Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1230 ATGGCAAAGTACTCATTAGAATCCTCGGCTTTGTTCTGCTCTCATTTCTCACAGATACACTTACCCTATCTAAAGCTTCATGAGAAAAGCGCAAAACTCTACAGATTCTGGACTGACTCTCTTATACGTGCCCTTTCTGCCAAAGAACTTCAAGGTTCTGCATTCTCTTGCACTTCCAGACAAAACGCGTATAAGCTCCTGATTGAAGACTTCGCAGTGCATGGGTTGGAAAAGATGAAGCTGCAACTCAAACTTGTTCTTGTTTTTGTTATTAGCTTGCTCTGGATTCAGCACTCATTTTGTGATGAACCTTCTGGTACTTCTGGTCTAAACAAATGGATATGTAGATGTTCTTTTCAAGGAAACCAGAGCTCCTCTCGTGCTAATTGTTCTACTTCTTGTGATTGCCGTTCAGATGCTAAAGAGAATGTATCGATATGGACATGTTTATGCGATCCCAATGGGTTTCCTAATGTGGAAGCAGATGGTCATAATCCTAATTGCTTTACCGCCTGCAACTGCGCCTGGGGAGCTGTCACCAACTCACGAGGTTCAAAGAAACACATTTCCAGCAAGATTGCTATAATTATTCTATTACTATGTGTTATATGCACAACTGTTGCATTTCTTGCCTTGATCATATGCTATATATGGCAAAGGGACAGATGTCCTATTCAACCGCCCATATTCTTATCAGATAAGGAAACAAGTTGCAATAGTACCACCAACTTAATTAGTTACAAGACTTCTTCCATTGCAGAAACAAAAGCAGTTATAAATCCTCCTATTAATCATATCACAGGATGCTTTCCGAAGGCCTCTTTCCTGTTTGGGAGCAAAAGAGAAACTTTTTGTGGAAATATTATTCAATTTTCATTTGCAGAACTGGAAAATGCCACTGAGAACTTTTCAGCTTCCAAGCTTATTGGACTTGGTGGAAGTAGCTATGTATATTGTGGTCAACTGAAGAGTGGTACTAATGTGGCAGTTAAACGAATAAAAGCTCAAGGAGGGCTCGAAGCAAACTCCATATTTTTCACAGAGATTGAACTACTTTGTAGACTTCATCATTGTCATCTGGTGCCTTTGCTTGGATTCTGCTCAGAATTAAAAGGGAAACATGTTGAGAGGCTACTAGTATTTGAGTACATGATTAACGGCAATTTGAGGGACTGTTTAGATGGAGTTTCTGGGAAAAACATGGATTGGGCTAAACGAGTTACAATTGCAATTGGAGCTGCAAGGGGCCTGGAATATCTCCATGAAGCAGCTGCTCCAAGAATTCTGCACAGAGATGTTAAATCGACAAACATTCTTCTCGATGAAAATTATCAAGCAAAAATAACTGATCTTGGTATGGCTAAAAACTTAAGAGCTGATGACCTCCCCAGCTGTTCAAGTTCTCCAGCAAGAATGCAGGGCACATTTGGCTATTTTGCACCCGAGTATGCAATTGTTGGAAGAGCCTCTCTAAAGTCAGATGTCTTCAGTTTCGGGGTGGTTCTCCTTGAGATTATCAGTGGTCGGCAACCCATCTATAAATCTACAGGCAAAGAAGAAAGCCTTGTTATATGGGCTGCTCCTCGCTTACAGGATAGTAGGAGGGTGATAACAGAGTTGGTTGATCCACGACTGGAAGGAAACTTCCCAGAAGAAGAGGTGCAGATAATGGCATACTTAGCAAAGGAGTGTTTGCTGTTGGATCCTGATACTCGGCCAACCATGAGTGAAGTTGTTCAAGTCCTTTCAACTATATCACCAGACAAGTCTAGGAGGACAAGAAACTTTCCAGTGACTAACTTCCAGGAACCAACAGATGTAGAGAAGCAAAGGCAAGCTTGGTCCAATAAAGTAGATAGTGACCACAATCTTCGTGTTGAGAACAAAAACAAAGAGGCAGATACAGTTTCAGCTGAGTATATGGAGAGTTTGGTCCTCGTGAACAGATTGTCAGAACATGAAATGGTAGACCTAACTGAGCCTCGGTTTGAATCATTTTGCATGACAGACGTTAATTCATTTTGA 2025 0.4109 MAKYSLESSALFCSHFSQIHLPYLKLHEKSAKLYRFWTDSLIRALSAKELQGSAFSCTSRQNAYKLLIEDFAVHGLEKMKLQLKLVLVFVISLLWIQHSFCDEPSGTSGLNKWICRCSFQGNQSSSRANCSTSCDCRSDAKENVSIWTCLCDPNGFPNVEADGHNPNCFTACNCAWGAVTNSRGSKKHISSKIAIIILLLCVICTTVAFLALIICYIWQRDRCPIQPPIFLSDKETSCNSTTNLISYKTSSIAETKAVINPPINHITGCFPKASFLFGSKRETFCGNIIQFSFAELENATENFSASKLIGLGGSSYVYCGQLKSGTNVAVKRIKAQGGLEANSIFFTEIELLCRLHHCHLVPLLGFCSELKGKHVERLLVFEYMINGNLRDCLDGVSGKNMDWAKRVTIAIGAARGLEYLHEAAAPRILHRDVKSTNILLDENYQAKITDLGMAKNLRADDLPSCSSSPARMQGTFGYFAPEYAIVGRASLKSDVFSFGVVLLEIISGRQPIYKSTGKEESLVIWAAPRLQDSRRVITELVDPRLEGNFPEEEVQIMAYLAKECLLLDPDTRPTMSEVVQVLSTISPDKSRRTRNFPVTNFQEPTDVEKQRQAWSNKVDSDHNLRVENKNKEADTVSAEYMESLVLVNRLSEHEMVDLTEPRFESFCMTDVNSF 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1230 674 PANTHER OS01G0750732 PROTEIN 111 605 - -
Bisa12g1230 674 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Bisa12g1230 674 FunFam receptor-like serine/threonine-protein kinase NCRK 384 594 - -
Bisa12g1230 674 CDD STKc_IRAK 309 582 - -
Bisa12g1230 674 Gene3D Transferase(Phosphotransferase) domain 1 384 603 - -
Bisa12g1230 674 ProSiteProfiles Protein kinase domain profile. 303 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1230 674 FunFam receptor-like serine/threonine-protein kinase NCRK 277 383 - -
Bisa12g1230 674 SMART serkin_6 303 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1230 674 Gene3D Phosphorylase Kinase; domain 1 277 383 - -
Bisa12g1230 674 SUPERFAMILY Protein kinase-like (PK-like) 285 582 IPR011009 -
Bisa12g1230 674 Pfam Protein tyrosine and serine/threonine kinase 306 582 IPR001245 GO:0004672|GO:0006468
Bisa12g1230 674 ProSitePatterns Protein kinases ATP-binding region signature. 309 331 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1230 Bisa-ChrBisa12 21088263 21095006 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1230 79 671 Receptor kinase-like Gene Family AT2G28250 53.088 0.0 588
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XVI Bisa12g1230 PK_Tyr_Ser-Thr 3.7e-42 CL0016