Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1225 ATGTGTAAAACCAAAATGGCCATTGACGCTGCTTCTCCTTCCTCAACCCGTCGAGCCTCTCGCACTCGCGCCTCACCCTCTCAGTCTCAACCCTCTTTCCAAACCCCAACACCACCAATCGCATCGTCCTCCGCCGCCACCTCCTCCTTCTTCCCTCCCTCTCCTTCGTACACCGCCTCCACGGGTTACCGGCTCACCTCCGACACCTCCATTTCAAGCCCATCCTCCCTTCCCACCTTTCGACACGCCCTACCTGAATCCCCTCACATCTACGATTTCTCTGAAATTTCCTCTGCCACCAACAATTTCCTCTCCAATCGCTACTCTTCCTCTTCTGCTACGCCCTCCTGGCGCTGCACGCTTCGCGGCAGAAACGTCGTCGTTTTCAGACGCCAATTCCGACGCCGAATCGAAACCGCCCAGCTCGGACAACGACTCTCTGTGATTTGTCGTAGCCACCACGTTAGCATCGTAAAGCTTCTCGGAGCTTCGATCTCCGGTCAGAACATCTACCTCGTGTACGAATTTCTCGGCGGAGCTAATCTCTCCGATTGTTTGCGAAATCCCAAGAACCCCCAATTTACTGTATTATCCAGCTGGATCTCGAGGATGCAGGTTGCGACGGATATCGCTCACGGACTCGATTATATTCATAATAGAATGGGCTTAGATGTGACATTCGTGCACAATCACATCGATAGCAATGGGATTATCGTCACAGAGCCTTCCTTCAATGCCAAGATCTGTCACTTCGGCGCCGCCCAGCTGTGCGGCGAAGTAGAAGAAATCGCCGATAAATCGTCCTCTTCCCCGTCGCTCACGAGATCGAATGAATTGAAACCGACGAGTAGCGTGAGGATTAAGATCGAAGGTGTGAGAGGATACATGTCGCCAGAATTTCAGTGCACCGGAGTGGCCACCAAGAAGTCCGACGTGTATGCTTTCGGAGTGGTGATGCTGGAACTCTTATCGGGAGAGGAGCCTCTGAAATATGTGTTGGACAAAAAGACGGGCGATTACATGAGAACCTCGGTGATCGAGACGGCGAGGACTGCCGTAGAAAGTGGTGCTTGCGGCGGCGATGGCGACGGCGGAGAAAGTAGGCTAAGGAAGTGGTTGGATCGAAGGCTGAAGGACTCGTTCCCTATTCAGGTTGCAGATAGAGTGACACGTGTAGCGTTAGAGTGCGTCCACGTGGATCCAGAAGAGAGGCCAGATATGACACGTGTCGCCGGGAGGATCTCGAAGCTGTATCTGGAGTCGAAGACTTGGTCCGACAATATTAGAGTGCCTTCTGAGATTTCAGTCTCGTTGGCTCCCCGATGA 1326 0.5309 MCKTKMAIDAASPSSTRRASRTRASPSQSQPSFQTPTPPIASSSAATSSFFPPSPSYTASTGYRLTSDTSISSPSSLPTFRHALPESPHIYDFSEISSATNNFLSNRYSSSSATPSWRCTLRGRNVVVFRRQFRRRIETAQLGQRLSVICRSHHVSIVKLLGASISGQNIYLVYEFLGGANLSDCLRNPKNPQFTVLSSWISRMQVATDIAHGLDYIHNRMGLDVTFVHNHIDSNGIIVTEPSFNAKICHFGAAQLCGEVEEIADKSSSSPSLTRSNELKPTSSVRIKIEGVRGYMSPEFQCTGVATKKSDVYAFGVVMLELLSGEEPLKYVLDKKTGDYMRTSVIETARTAVESGACGGDGDGGESRLRKWLDRRLKDSFPIQVADRVTRVALECVHVDPEERPDMTRVAGRISKLYLESKTWSDNIRVPSEISVSLAPR 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1225 441 Gene3D Phosphorylase Kinase; domain 1 69 176 - -
Bisa12g1225 441 ProSiteProfiles Protein kinase domain profile. 93 419 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1225 441 MobiDBLite consensus disorder prediction 1 49 - -
Bisa12g1225 441 Pfam Protein tyrosine and serine/threonine kinase 135 411 IPR001245 GO:0004672|GO:0006468
Bisa12g1225 441 PANTHER OS09G0572100 PROTEIN 1 441 - -
Bisa12g1225 441 Gene3D Transferase(Phosphotransferase) domain 1 179 432 - -
Bisa12g1225 441 MobiDBLite consensus disorder prediction 9 49 - -
Bisa12g1225 441 SUPERFAMILY Protein kinase-like (PK-like) 119 410 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1225 Bisa-ChrBisa12 20959524 20960849 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1225 48 434 Receptor kinase-like Gene Family AT1G51940 29.323 8.28e-40 149
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bisa12g1225 PK_Tyr_Ser-Thr 2.9e-23 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1225 12 20959524 20960849 Bisa12g1225 12 20959524 20960849 ECH