Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1215 ATGCGTGTGGAGAAACAGAGTGATAGATACTTCTGGAAATTAGAACTAATACTAAATAAAAGATTCAAGTTTGAAGGTTCCGTGAATCTGTTTGTAAGTGATCCTTTGGGAAACTCGATGAGTCTCTTCCCTGTTCACTACGTTCATGCGGCGACTTGGATTCTGCTTACATCACTTTGTTTGATTAAATTAAATCTAAACCCTTTGGGAATCCCACTGGCTCTGCCTCTGCCTCCTCTTCCCCTATTCCATTGTCAACGCTTTCCCACCTATATATACCCTCTCCCTTCCATTCCATCTCTTAACACTTCTCTTTCACTTCCTGAATCCCCAATTCCCGAGCTACCAACAATGGCCGACGTTGAGGGATTCCCAGGAAGCTCCATGCACGGAGTCACAGGCCGAGAACAGACCTTCATGGCCTCTGTTCCTTCCCCAATTGTCCCCTCTGACCCCACCGCCAAATTCGCCCTCCCTGTGGACTCCGAGCACAAAGCTAAAGTCTTTAAGCTCTTCTCCCTCGCCAACCCCCACATGCGAACCTTCCACCTCTCCTGGATCTCCTTCTTCACCTGCTTCGTCTCCACCTTCGCCGCCGCCCCTCTTGTCCCCATCATCCGCGACAACCTCAACCTCACCAAGTCCGATATCGGAAATGCAGGGGTCGCCTCTGTCTCCGGCAGCATCTTCTCCAGGCTCATCATGGGTGCAGTGTGCGACCTCCTCGGACCACGCTACGGCTGCGCCTTCCTCATCATGCTCTCTGCTCCAACAGTGTTCTGCATGTCCTTTGTCAAAGACGCTGCTGGTTACATCGTGATTCGGTTCTTGATTGGGTTCTCGCTGGCCACGTTTGTGTCGTGTCAGTACTGGATGAGTACGATGTTTAACAGCAAGATTGTGGGGCTGGCCAACGGGACAGCGGCGGGGTGGGGCAACATGGGAGGTGGGGCAACTCAGCTCATAATGCCATTGGTCTATGAACTCATCAAGAGAGCAGGAGCCACTCCATTTGTAGCATGGAGGATCGCCTTCTTCGTCCCAGGATGGTTACATGTCATCATGGGAGTCCTTGTCTTGACCCTCGGCCAGGACTTGCCTGATGGTAACCTGGGTGCCTTACAGAAGAAGGGTGATGTTGCCAAAGACAAGTTCTCTAAGGTGTTGTGGTATGCTGTAACAAACTACAGGACATGGATTTTTGTTCTACTGTATGGATACTCTATGGGAGTTGAACTAACCACTGACAACGTCATTGCTGAGTATTTCTTTGATAGGTTTGATTTGAAGCTGCATACAGCTGGAATCATTGCTGCTTCGTTTGGAATGGCCAATATTGTAGCTCGTCCTTTTGGTGGATACACTTCAGATCTTGCTGCTCGTTTGTTTGGGATGAGAGGCAGACTGTGGAACCTTTGGATTCTTCAAACCTTGGGAGGAGTTTTCTGTATATGGCTTGGGCGTGCCAATTCTCTTCCTATTGCTGTGGTAGCCATGATTCTATTCTCCATTGGAGCTCAAGCTGCTTGTGGTGCAACTTTTGGCATCATCCCCTTCATCTCAAGGCGTTCTCTCGGCATCATATCTGGGCTAACTGGTGCGGGTGGAAACTTCGGGTCGGGTTTGACCCAGTTGATTTTCTTCTCAACCTCAAGATACTCAACAGCCACAGGTTTGTCCTTGATGGGTATAATGATTGTGTGCTGCACTGTTCCTGTGACCATTGTTCACTTCCCACAGTGGGGAGGCATGTTCACTCCTCCTTCGAAAGACATCAACAAATCCACTGAAGAACACTATTATGCATCTGAATGGAATGAAGAGGAGAGGCAAAAGGGGTTGCACCAGCATAGTCTCAAATTTGCAGAGAATAGTCGCTCTGAGAGAGGCAAGCGTGTGGCTTCTGCTCCTACACCCCCAAACACAACTCCCTCCCATGTGTAG 1944 0.4943 MRVEKQSDRYFWKLELILNKRFKFEGSVNLFVSDPLGNSMSLFPVHYVHAATWILLTSLCLIKLNLNPLGIPLALPLPPLPLFHCQRFPTYIYPLPSIPSLNTSLSLPESPIPELPTMADVEGFPGSSMHGVTGREQTFMASVPSPIVPSDPTAKFALPVDSEHKAKVFKLFSLANPHMRTFHLSWISFFTCFVSTFAAAPLVPIIRDNLNLTKSDIGNAGVASVSGSIFSRLIMGAVCDLLGPRYGCAFLIMLSAPTVFCMSFVKDAAGYIVIRFLIGFSLATFVSCQYWMSTMFNSKIVGLANGTAAGWGNMGGGATQLIMPLVYELIKRAGATPFVAWRIAFFVPGWLHVIMGVLVLTLGQDLPDGNLGALQKKGDVAKDKFSKVLWYAVTNYRTWIFVLLYGYSMGVELTTDNVIAEYFFDRFDLKLHTAGIIAASFGMANIVARPFGGYTSDLAARLFGMRGRLWNLWILQTLGGVFCIWLGRANSLPIAVVAMILFSIGAQAACGATFGIIPFISRRSLGIISGLTGAGGNFGSGLTQLIFFSTSRYSTATGLSLMGIMIVCCTVPVTIVHFPQWGGMFTPPSKDINKSTEEHYYASEWNEEERQKGLHQHSLKFAENSRSERGKRVASAPTPPNTTPSHV 647
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1215 647 MobiDBLite consensus disorder prediction 607 630 - -
Bisa12g1215 647 ProSiteProfiles Major facilitator superfamily (MFS) profile. 181 575 IPR020846 GO:0022857
Bisa12g1215 647 MobiDBLite consensus disorder prediction 607 647 - -
Bisa12g1215 647 SUPERFAMILY MFS general substrate transporter 176 576 IPR036259 -
Bisa12g1215 647 PANTHER HIGH-AFFINITY NITRATE TRANSPORTER 2.3 118 633 IPR044772 GO:0015112
Bisa12g1215 647 FunFam High affinity nitrate transporter 174 371 - -
Bisa12g1215 647 FunFam Nitrate transporter 2.1 382 583 - -
Bisa12g1215 647 CDD MFS_NRT2_like 182 574 IPR044772 GO:0015112
Bisa12g1215 647 Pfam Major Facilitator Superfamily 186 542 IPR011701 GO:0022857|GO:0055085
Bisa12g1215 647 Gene3D MFS general substrate transporter like domains 381 582 IPR036259 -
Bisa12g1215 647 Gene3D MFS general substrate transporter like domains 175 370 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1215 Bisa-ChrBisa12 20720028 20722202 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1215 118 647 Inorganic Solute Cotransporters AT1G08090 78.868 0.0 890
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1215 12 20720028 20722202 Bisa12g1215 12 20720028 20722202 ECH