Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1205 ATGGAGCCTGCTTCCTCTTTACTAACACTCGAAGTTCTGAATGTGAATCCGAACCCGAATCCTGATCCAGTTAAAGCCCCCTTTTTTATGGAACGACGTCGTCTAGCTCTTCCTATAGCCTTCCCTGAAGTATTCTCCGATCTCTTTGATTGTCTTGAAGGTTTGTGCTTAAGGATGGTGTCGGACGCGAGTAAAAGGAAGGCAGCACAGAAGAAGGCTGCTGCTGCTGCTAAGAGAGGAGGCAAGGCGGCGGCGGCTGCTGCTTCATCAAAAGCGGCCGCGTTGGAGGCTCGGAAGGCTGCCGTTAAGGTAGCTAATGAAGTTGCGAAACTTCAGATATCTGATCGGACATGTACCGGCGTCCTCTGCTCGCATCCTCTTTCTAGAGATATTCGGATTGAGTCTCTATCAGTTACGTTCCACGGACATGATCTCCTAGTTGATTCTGAATTGGAGCTAAATTATGGCAGACGTTATGGTTTACTTGGACTAAATGGTTGTGGAAAATCTACTCTCCTTAAGGCAATAGGTTATCGTGAGCTGCCAATTCCAGATCACATGGATATTTATCACCTTAGCCAAGAAATTGAAGCTTCTGACATGTCTGCATTGGAGGCTGTCATAAACTGTGATGAGGAAAGGTTGAAACTGGAGAAAGAAGCTGAAGCTTTGGCAGCACAGGAAGATGGAGGTGGTGAAAGCCTGGAACGTGTTTATGAACGGTTGGAAGCAATAGATGCATCAACTGCAGAAAAGCGTGCTGCTGAAATTTTATATGGCCTTGGTTTTAACAAGCAGATGCAGGCAAAGAAGACGCGTGATTTCTCTGGTGGTTGGAGAATGAGGATAGCATTAGCAAGAGCTCTATTTATGAACCCAACTATTCTTTTGCTTGATGAACCAACCAATCACCTAGATTTGGAAGCATGTGTATGGCTGGAGGAGAACTTGAAAAAATTTGACCGCATTCTGGTTGTGGTTTCACACTCTCAGGATTTTCTTAATGGTGTCTGCACAAACATCATCCACATGAAAAACAAGAAGCTGAAGATCTACACTGGTAACTACGATCAGTATGTGCAAACACGTGCTGAATTAGAAGAAAACCAGATGAAGCAGTACAGGTGGGAACAGGAGCAGATTGCCTCAATGAAGGAATATATTGCCCGATTTGGTCATGGATCGGCAAAGCTAGCTCGCCAGGCACAGAGTAAAGAAAAAACACTGGAAAAAATGGAACGGGGTGGACTTACTGAGAAGGTTGTCAGAGACAAAGTTTTGGTATTCCGCTTTGTTGATGTGGGAAAGCTTCCTCCTCCTGTTCTTCAGTTTGTCGATGTGACATTTGGTTACACCCCAGATAATCTCTTATACAAAAACCTTGATTTTGGGGTGGACTTGGACTCTAGGATTGCACTGGTTGGACCCAATGGCGCTGGGAAGAGTACACTGCTGAAGCTCATGACTGGGGATCTTATTCCTACAGATGGCATGGTCCGACGGCATAACCACCTCCGCATTGCACAATTTCATCAGCACCTGGCTGAGAAGCTGGATTTGGAAATGTCTGCTCTCCAGTATATGACGAAAGAGTACCCTGGAAATGAGGAAGAGAAAATGAGGGCGGCTATTGGGAAGTTTGGACTGTCAGGTAAAGCCCAGGTGATGCCTATGAAGAATTTGTCTGATGGGCAGCGGAGCCGTGTGATTTTTGCTTGGTTAGCTTATAGGCAGCCTCACTTACTGCTTTTGGATGAGCCAACTAATCATTTGGATATTGAGACAATCGACTCATTGGCAGAGGCATTGAATGAATGGGATGGTGGTATGGTGCTTGTTAGCCATGATTTTAGGCTCATAAATCAGGTGGCCCATGACATATGGGTATGTGCGGACCAAACTGTGACCAGATGGGATAGTGACATTATGGACTTCAAGGAGCATCTAAAGGCAAAGGCTGGTTTATCTGACTGA 1974 0.4549 MEPASSLLTLEVLNVNPNPNPDPVKAPFFMERRRLALPIAFPEVFSDLFDCLEGLCLRMVSDASKRKAAQKKAAAAAKRGGKAAAAAASSKAAALEARKAAVKVANEVAKLQISDRTCTGVLCSHPLSRDIRIESLSVTFHGHDLLVDSELELNYGRRYGLLGLNGCGKSTLLKAIGYRELPIPDHMDIYHLSQEIEASDMSALEAVINCDEERLKLEKEAEALAAQEDGGGESLERVYERLEAIDASTAEKRAAEILYGLGFNKQMQAKKTRDFSGGWRMRIALARALFMNPTILLLDEPTNHLDLEACVWLEENLKKFDRILVVVSHSQDFLNGVCTNIIHMKNKKLKIYTGNYDQYVQTRAELEENQMKQYRWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLEKMERGGLTEKVVRDKVLVFRFVDVGKLPPPVLQFVDVTFGYTPDNLLYKNLDFGVDLDSRIALVGPNGAGKSTLLKLMTGDLIPTDGMVRRHNHLRIAQFHQHLAEKLDLEMSALQYMTKEYPGNEEEKMRAAIGKFGLSGKAQVMPMKNLSDGQRSRVIFAWLAYRQPHLLLLDEPTNHLDIETIDSLAEALNEWDGGMVLVSHDFRLINQVAHDIWVCADQTVTRWDSDIMDFKEHLKAKAGLSD 657
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1205 657 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 442 657 IPR003439 GO:0005524
Bisa12g1205 657 FunFam ATP-binding cassette sub-family F member 3 402 656 - -
Bisa12g1205 657 Coils Coil 395 415 - -
Bisa12g1205 657 CDD ABCF_EF-3 442 634 - -
Bisa12g1205 657 CDD ABCF_EF-3 131 348 - -
Bisa12g1205 657 Coils Coil 207 227 - -
Bisa12g1205 657 FunFam Abc transporter f family member 1 131 395 - -
Bisa12g1205 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 124 371 IPR027417 -
Bisa12g1205 657 Pfam ABC transporter 458 589 IPR003439 GO:0005524
Bisa12g1205 657 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 131 371 IPR003439 GO:0005524
Bisa12g1205 657 Coils Coil 349 369 - -
Bisa12g1205 657 SMART AAA_5 155 355 IPR003593 GO:0016887
Bisa12g1205 657 SMART AAA_5 467 655 IPR003593 GO:0016887
Bisa12g1205 657 Pfam ABC transporter 342 418 IPR032781 -
Bisa12g1205 657 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 425 638 IPR027417 -
Bisa12g1205 657 Gene3D - 131 395 IPR027417 -
Bisa12g1205 657 Pfam ABC transporter 148 303 IPR003439 GO:0005524
Bisa12g1205 657 ProSitePatterns ABC transporters family signature. 275 289 IPR017871 GO:0005524|GO:0016887
Bisa12g1205 657 Gene3D - 406 655 IPR027417 -
Bisa12g1205 657 PANTHER ATP-BINDING TRANSPORT PROTEIN-RELATED 85 652 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1205 Bisa-ChrBisa12 20582672 20587108 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1205 262 329 Calmodulin-binding Proteins AT2G36910 41.429 7.64e-08 53.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1205 12 20582672 20587108 Bisa12g1205 12 20582672 20587108 ECH