Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1175 ATGGCGTTTGTGAGTTACTGTGCATTGATACTTGTTTTCGTTTTTGTCGTGACTTTCGAATCTTCATGTTCATCCTCTGGCAATAAGTTATCCCTATCAGTGGAGAATCCAGAAGACGTTGTGAAATCAACAAATGGGATGTTCAGTGCTGGGTTCTACGCGGTGGGTGAGAATGCCTATTCCTTTGCCATCTGGTTCACCGAGCCTCCTGGCAAAAACTTGACAGCAATTTGGATGGCTAACCGAGAGCAACCCGTCAATGGTGTGGGCTCAACGCTTGTCCTCCACCACACAGGTAATCTGGTGTTAAACGACGCCGGTTACTTGGATGTTTGGGCCACCAACACCACCTCAGCTACCTCCCCACGATTAGTTCTGAACAATGACGGTAATCTTGTTCTGTATGGATCCCATGATAGTGGCGGTGGCGATATTCTGTGGCAAAGTTTTGATCATCCAACAGATACACTTGTCCCTGGACAACGTCTCACAAGATACGCTAGCCTCGTCTCCTCCAGAAGTCAAACTGATCGCTCCTCTGGCTTCTATAAATGGTTTTTCGATAACGACAATATTCTTCGTCTTCTCTATGATGGACCTAAAGTTTCAAGTGTTTACTGGCCAGATCCCTGGCTCCTCAGCTCGGATGCTGGAAGGTCTACCTACAATGCCACTCGAATAGCAGTCCTTGATTCCTATGGTAATTTCAATTCAACTGATTATTTCACTTTCAAGACCTCAGATTATGGCCCTGTGCTTCAGAGAAGATTAACCATTGATTATGATGGTAATGTGCGAGTGTACAGTCGATCAAACTGGGGAGAGAAATGGCTTGTTTCGTGGGTGGTCAAATCAGAACCTTGCCAAATTCATGGCATCTGCGGAGCCAATAGTGTGTGTACCTATGATCCTTATTTTGGTAGTAAATGCTCTTGTCTACCAGGTTATAAGGTTAAGAATAAAAACGACTGGTCTTTTGGGTGCAAGCCAAAATTCAATTTATCTTGCAACTCAACTGAGTCTCGCTTTTTGTTTATACAGAATGCTCAGTTCTACGGCGGCTATGGCATTGGATCCTTCTCAAATCACACATATAGTCAATGTGCGGATGAATGCTTGAAATTATGCGACTGCAAAGGCTTCAATTATAGGTTTGAACCGAAATATGGAACTTATTCTTGTTACCCAAAAACCAGGTTGCTTAATGGGTATCTATCTCCTCATTTCCTTGGATCACTTTACTTGAGACTCCCAAAAGCTAGTTCTTTTGATTTTGAAGAATCCATTATGAAATGTAACGATGTGAACATTGTGAAGCTTGAGAGAGTGTATGCCTTAAGACATGGCAAAGTTACAGTAAAGGCATTTCTATGGTTGGTGTTGGGAATTGGATGCTTTGAGATTGTGTGCATCTTTCTAGTTTGGTGTCTATTGACCAGAACAGAGAAAAAGTCCAATGCAAATGGACACAACTACTATCATACTGCAACAGGATTCAAGAATTATAGCTATAATGAGCTGAAGGAGGCAACAAGAGGGTTTAGTGAAGAGATAGGAAGGGGTGCTGGAGGAATCGTATATAAGGGTGTGTTGTCAAATCAAAGAGTTGCAGCAATCAAGAGACTCAACGAAGCCGCCAACCAAGGAGAAAGTGAGTTTTTGGCTGAAGTGAACATAATTGGAAACCTTAATCACATGAACTTGATTGACATGTGGGGGTATTGTGCAGAGGGAAAGCATAGGCTGTTGGTGTATGAGTATATGGAGAATGGTTCCTTAGCTGAAAATCTTGTTTTCAACAACAACTCACTTGATTGGAAAAAGAGGTATGACATCGCTTTGAGGACAGCCAGAGGTCTAGCTTATCTTCACGAAGAATGCCTGGAGTGGATTTTGCATTGCGATATAAAGCCTCAAAACATACTTTTAGATTCAAATTATCAACCCAAGGTAGCAGATTTTGGATTATCTAAGCTACTAAACAGGAATAACCACAACAATTCAAGCTTCTCAAGAATTAGAGGAACAAGAGGTTATATGGCACCTGAGTGGGTTCTCAATCTACCAATCACGTCTAAAGTAGATGTTTATAGCTATGGCATTGTTGTGTTGGAGATGATAACAGGAAAAAGCCCAAGGGACTTCCAAATGGTTGATATAGAAGAGTCGAATCATGGAAGTCTAGTAACATGGGTGAGGGAGAAAATGAACAGTGGAAATAAAATAACATCATGGGTTGAACAAATTATTGATCTTAGGGTTGAAGGAAGTTATGACATAAATAAGATGGAGATTTTGGCCAAACTAGCTTTGGACTGTGTTAAGGAAGAGATGAATGCAAGACCTACGATGAGTCAAATAGTAGAGATGCTTCAAAATCATGACATTGATTCTCTGTAA 2400 0.4133 MAFVSYCALILVFVFVVTFESSCSSSGNKLSLSVENPEDVVKSTNGMFSAGFYAVGENAYSFAIWFTEPPGKNLTAIWMANREQPVNGVGSTLVLHHTGNLVLNDAGYLDVWATNTTSATSPRLVLNNDGNLVLYGSHDSGGGDILWQSFDHPTDTLVPGQRLTRYASLVSSRSQTDRSSGFYKWFFDNDNILRLLYDGPKVSSVYWPDPWLLSSDAGRSTYNATRIAVLDSYGNFNSTDYFTFKTSDYGPVLQRRLTIDYDGNVRVYSRSNWGEKWLVSWVVKSEPCQIHGICGANSVCTYDPYFGSKCSCLPGYKVKNKNDWSFGCKPKFNLSCNSTESRFLFIQNAQFYGGYGIGSFSNHTYSQCADECLKLCDCKGFNYRFEPKYGTYSCYPKTRLLNGYLSPHFLGSLYLRLPKASSFDFEESIMKCNDVNIVKLERVYALRHGKVTVKAFLWLVLGIGCFEIVCIFLVWCLLTRTEKKSNANGHNYYHTATGFKNYSYNELKEATRGFSEEIGRGAGGIVYKGVLSNQRVAAIKRLNEAANQGESEFLAEVNIIGNLNHMNLIDMWGYCAEGKHRLLVYEYMENGSLAENLVFNNNSLDWKKRYDIALRTARGLAYLHEECLEWILHCDIKPQNILLDSNYQPKVADFGLSKLLNRNNHNNSSFSRIRGTRGYMAPEWVLNLPITSKVDVYSYGIVVLEMITGKSPRDFQMVDIEESNHGSLVTWVREKMNSGNKITSWVEQIIDLRVEGSYDINKMEILAKLALDCVKEEMNARPTMSQIVEMLQNHDIDSL 799
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1175 799 SMART serkin_6 512 791 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1175 799 Gene3D Transferase(Phosphotransferase) domain 1 588 798 - -
Bisa12g1175 799 CDD B_lectin 43 153 IPR001480 -
Bisa12g1175 799 PANTHER OS07G0415500 PROTEIN 8 793 - -
Bisa12g1175 799 Pfam S-locus glycoprotein domain 235 319 IPR000858 GO:0048544
Bisa12g1175 799 FunFam Serine/threonine-protein kinase 588 798 - -
Bisa12g1175 799 CDD STKc_IRAK 518 793 - -
Bisa12g1175 799 Pfam Protein kinase domain 515 789 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1175 799 ProSiteProfiles PAN/Apple domain profile. 336 418 IPR003609 -
Bisa12g1175 799 Gene3D - 31 151 IPR036426 -
Bisa12g1175 799 PIRSF SRK 1 798 IPR024171 GO:0004674
Bisa12g1175 799 Gene3D Phosphorylase Kinase; domain 1 477 587 - -
Bisa12g1175 799 SMART blect_4 31 153 IPR001480 -
Bisa12g1175 799 ProSitePatterns Serine/Threonine protein kinases active-site signature. 631 643 IPR008271 GO:0004672|GO:0006468
Bisa12g1175 799 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 167 IPR036426 -
Bisa12g1175 799 Pfam D-mannose binding lectin 75 165 IPR001480 -
Bisa12g1175 799 SUPERFAMILY Protein kinase-like (PK-like) 489 792 IPR011009 -
Bisa12g1175 799 ProSiteProfiles Protein kinase domain profile. 512 797 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1175 799 ProSitePatterns Protein kinases ATP-binding region signature. 518 540 IPR017441 GO:0005524
Bisa12g1175 799 FunFam S-receptor-like serine/threonine-protein kinase 480 587 - -
Bisa12g1175 799 ProSiteProfiles Bulb-type lectin domain profile. 25 147 IPR001480 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1175 Bisa-ChrBisa12 20027843 20030242 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1175 495 791 Receptor kinase-like Gene Family AT3G58690 39.672 4.41e-68 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa12g1175 Pkinase 3.3e-55 CL0016