Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1151 ATGCCTCCTCGCCGCGGCGGAAAGCAACCTGATATTCGCCGGGATCAATCGTCTCCGGCGTCATCCCAATCCACTCCGGGCCGAGGTGCTGGTCGAGGTCGGCCACAGGGCGGACGGGGACGCGGAGCTGCTTCTGTTCCGGTGCCGTCTGGTCCTCCGGCTCCGGTCATTCCTCCGTCCGTGACTAGGGAAGTTCCGTCAAGGTCAACTGCTCCCCAGCCATCTCCATCTGAGGTTTCGGCTTCGAGTTCTATAGATGTTCTGAGTACTGAGGTTGCGCAGCAGCTGGCATTGCAGTCTTCGGCGCCTTCTTCGTCGAAGGCCATCAGGTTTCCTGACCGGCCAGATGTCGGTAAAGTCGGGAAGAAAATTCAAGTTCGCGCGAATCATTTTCTTGTCCAAGTTGCTGACAGAGATATCCATCATTATGATGTGTCCATAACTCCAGAAGTTACTTCAAAAAGGATCAACAGACTAGTGATGAGTCAGTTAATCCAATTGTACCGAGAGTCACACTTGGGTAGGCGTATACCGGCTTATGATGGCCGGAAGAGTCTGTTTACAGCAGGCCCATTGCCCTTTTCTTCAAAGGAATTTAGGGTCAAGTTGGTTGAAAACGAAGAACATGCCGAATCTTCTGGTTCAGCAAGAAAGGTGCGTGAGCGCGAGTTTAAGGTCACAATTCGTTATGCTTCCAAGGCTGACCTCCATCATCTGCAACAGTTTCTAAGACGTCTACAATTGGACAGTCCACAGGAGACCATACAAGCTCTTGATGTTGTTCTGAGGGCATCGCCATCGGAAAAGTATACTGTTGTGGGGAGGTCATTCTTCTCACCATTTTTGGGTCGAACGGGAGAGCTTGGCGATGGTATAGAATACTGGAGAGGATATTATCAAAGCCTTCGGCCGACCCAAATGGGACTTTCCCTTAATATTGATGTATCAGCCAGGGCATTCTATGAGAACATCTTCGTGACTCAATTTATTTTCAAACATTTTAATTTTAGTTTTTCAAGGCCTCTATCTGATCAGGAACGTTTTAAGGTCAAGAAAGCTTTGAGAGGAATTAAGGTAGAACTTTATAACGGTCAGTCTATGAAAAGTTACAAAGTCACTGGAGTTTCAAAAGATCCACTCAGCGAATTAATGTTTCTTCTCGATGATAAAAAAACAAAAACAACTGTTGTTCAATATTTTCGTGAGAAATACAATGTTGAGCTCGAGTGTTTGGCTCTTCCTGCCCTCCAAGCTGGGAGTGACACAAAGCCTATTTATTTGCCCATGGAGCTTTGTAAGATTGCTGCTGGACAAAGGTACTCCAAGAGACTGAATGACAAGCAAGTAACTGCTCTTTTGAGAGCATCCTGTCAGCGACCCAATGAGAGGGAGAGAGACATTAGAGAGATGGTTAGGAATAACAATTTCAGCAAAGACAAACAAGTTCACGAATTTGGAATTGGAGTGAGGGAAGAACTTGCGTTGTGTGATGCTCGTGTTTTGCCCCCACCAAGGCTTAACTATCATGAATCTGGAGGAGAAAGAAGTGTTGAACCCTTGAGGGGTCAGTGGAATATGATAAACAAGAAAATGATTGATGGTGGGAAGGTCGAGCATTGGACTTGTCTTAACTTCTCTACACGGGTGCATAGAGATTTGCCATTTCAATTCTGTGATGAGTTGGTTAAAATGTGTACCAGCAAAGGAATGGTTTTCAATAGAAAGCCTTTACTTCCTATAAGATCAGCTCACCCAAATCAAATGGACGGAGCTCTCAGGGATGTTTACAAGCATTCTAAGGGGGCACTTCAATTGCTGATTATTATCTTGCCTGATACCAAAGGTTCATACGGAAAGATAAAACGCATATGTGAAACAGAGTTGGGAATAGTGTCTCAATGCTCTCAACCGAGGGAAGCATCTAAGCTGCAAAAGCAATATCTGGAAAATTTGGCCCTTAAGATTAATGTCAAGGTTGGTGGACGAAATACTGTGTTAAATGATGCAATTCTTAGAAGAATCCCACATGTGACTGATCGCCCTACAATAATCTTCGGCGCAGATGTGACACATCCTCAGCCTGGGGAGGACTCAAGTCCTTCTATAGCAGCTGTAGTAGCATCTATGGATTGGCCAGAGGTCACTAAGTACAGGGGAATTGTTTCTGCTCAGAGTCACCGTGAGGAAATAATACAAGACCTCTATAAATCTTATCAGGATCCTCAGAAGGGACTTGTCCATGGTGGAATGATTAGGGAGCTGCTTGTTTCATTCTATAAATCAACCAAGTTTAAACCGGACAGGATTATATTCTACAGAGATGGCGTTAGTGAAGGGCAGTTTAGTCAGGTTTTGCTCTATGAAATGGAAGCGATAAGAAAGGCTTGTGCCTCATTACAGGAAGGATATCAACCAAGAGTTACCTTTGTGGTGGTACAGAAAAGACACCACACCCGTCTCTTTCCTGTAGATCACGGTAGTCGTGATCAGACTGATAAAAGTGGAAATATTCTACCAGGAACTGTTGTCGATACAACTATTTGCCACCCCAGAGAGAATGATTTTTACCTGAACAGCCACGCTGGCATTAAGGGAACTAGCCGACCCGCGCACTATCATGTCCTATATGATGAAAATTACTTCAAGTCCGACGAATTGCAGACGTTAACATATAATTTATGTTACACGTATGCAAGGTGCACTCGATCAGTTTCAATAGTTCCTCCTGCATATTATGCCCACTTAGCAGCTTTCCGAGCTCGCTACTACATAGAGGGTGAGACGTCAGAAGTGGATACTTCGAGTGGAGGCAGGAGAGTTGACGTGGAGGTGAACCTTCCCTCCATAAAGGAGAATGTCAAAGATGTCATGTTTTTCTGCTGA 2883 0.4492 MPPRRGGKQPDIRRDQSSPASSQSTPGRGAGRGRPQGGRGRGAASVPVPSGPPAPVIPPSVTREVPSRSTAPQPSPSEVSASSSIDVLSTEVAQQLALQSSAPSSSKAIRFPDRPDVGKVGKKIQVRANHFLVQVADRDIHHYDVSITPEVTSKRINRLVMSQLIQLYRESHLGRRIPAYDGRKSLFTAGPLPFSSKEFRVKLVENEEHAESSGSARKVREREFKVTIRYASKADLHHLQQFLRRLQLDSPQETIQALDVVLRASPSEKYTVVGRSFFSPFLGRTGELGDGIEYWRGYYQSLRPTQMGLSLNIDVSARAFYENIFVTQFIFKHFNFSFSRPLSDQERFKVKKALRGIKVELYNGQSMKSYKVTGVSKDPLSELMFLLDDKKTKTTVVQYFREKYNVELECLALPALQAGSDTKPIYLPMELCKIAAGQRYSKRLNDKQVTALLRASCQRPNERERDIREMVRNNNFSKDKQVHEFGIGVREELALCDARVLPPPRLNYHESGGERSVEPLRGQWNMINKKMIDGGKVEHWTCLNFSTRVHRDLPFQFCDELVKMCTSKGMVFNRKPLLPIRSAHPNQMDGALRDVYKHSKGALQLLIIILPDTKGSYGKIKRICETELGIVSQCSQPREASKLQKQYLENLALKINVKVGGRNTVLNDAILRRIPHVTDRPTIIFGADVTHPQPGEDSSPSIAAVVASMDWPEVTKYRGIVSAQSHREEIIQDLYKSYQDPQKGLVHGGMIRELLVSFYKSTKFKPDRIIFYRDGVSEGQFSQVLLYEMEAIRKACASLQEGYQPRVTFVVVQKRHHTRLFPVDHGSRDQTDKSGNILPGTVVDTTICHPRENDFYLNSHAGIKGTSRPAHYHVLYDENYFKSDELQTLTYNLCYTYARCTRSVSIVPPAYYAHLAAFRARYYIEGETSEVDTSSGGRRVDVEVNLPSIKENVKDVMFFC 960
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1151 960 Gene3D - 500 668 - -
Bisa12g1151 960 SMART Piwi_a_2 605 925 IPR003165 GO:0003676
Bisa12g1151 960 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 105 926 - -
Bisa12g1151 960 FunFam protein argonaute 10-like 673 960 - -
Bisa12g1151 960 CDD PAZ_argonaute_like 326 435 - -
Bisa12g1151 960 MobiDBLite consensus disorder prediction 63 83 - -
Bisa12g1151 960 FunFam Argonaute 10 500 667 - -
Bisa12g1151 960 SUPERFAMILY Ribonuclease H-like 600 925 IPR012337 -
Bisa12g1151 960 ProSiteProfiles PAZ domain profile. 340 436 IPR003100 GO:0005515
Bisa12g1151 960 CDD Piwi_ago-like 482 924 IPR045246 -
Bisa12g1151 960 Gene3D - 673 960 IPR036397 GO:0003676
Bisa12g1151 960 SMART DUF1785_2 271 323 IPR014811 -
Bisa12g1151 960 Pfam Piwi domain 606 924 IPR003165 GO:0003676
Bisa12g1151 960 Pfam Argonaute linker 1 domain 273 322 IPR014811 -
Bisa12g1151 960 ProSiteProfiles Piwi domain profile. 605 925 IPR003165 GO:0003676
Bisa12g1151 960 MobiDBLite consensus disorder prediction 1 83 - -
Bisa12g1151 960 SUPERFAMILY PAZ domain 123 477 IPR036085 GO:0005515
Bisa12g1151 960 Pfam PAZ domain 349 452 IPR003100 GO:0005515
Bisa12g1151 960 Pfam Mid domain of argonaute 519 597 IPR032473 -
Bisa12g1151 960 SMART PAZ_2_a_3 328 458 IPR003100 GO:0005515
Bisa12g1151 960 Gene3D paz domain 318 440 - -
Bisa12g1151 960 Pfam N-terminal domain of argonaute 122 262 IPR032474 -
Bisa12g1151 960 Pfam Argonaute linker 2 domain 462 508 IPR032472 -
Bisa12g1151 960 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1151 Bisa-ChrBisa12 19353667 19360103 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1151 68 960 Eukaryotic Initiation Factors Gene Family AT1G48410 58.602 0.0 1096