Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1139 ATGGAGGTTAAAAATGGTACGGCCAACACAGAGTCTCCGGCCGACCCGCCCGGGACCCCGACAGCAAAGGGATGCGACGCCGCGCCGGAGGTGATGGGAGGCGAGGAGACTTCCCTGAGCTCTGTGGTTGTTGTCGGAGGAGGAAAGTCCGAGGTTGTCGGGTCGGAAATGATGGCGGTGAAGAAGAGGAGGGGAAGGTCGAGGAAGCACGATGTTAATGGGAACCTGCTGTCGCCGGCGTCGGCGCCGTCTCCGCTGGGGTTCGCCGATTACTCGTTCGGAAGGTGTGGCAAGCGAAGCAGAGGACGGCCTCGCGGATCGGGAAAATTGCAGCTTTTGGCTTCCATTGGTGGAGTGGTTGCAGACACAGCTGGGGGAAGCTTCACGCCTCATGTGGTGACTGTGAATGCTGGGGAGGATGTGGTGAGTAAAATAGTATCGTTCTCTCAGAGAGGCCCTCGAGCTGTATGCATACTTTCAGCAACAGGTGCAGTATCAAGTGTCATCATTCGTCAACCTAGCTCTTCTGGTGGTCTTTTGAGATTTGAGGGACGGTTTGAGATAATATCATTGACGGGATCATACACCTCGGGTGACGGTGGCCGTCGAAAAAGTGGGATGCTTAGTGTGTCACTGGCCAACCCTGATGGCAAGGTTTTTGGCGGCGGCGTTGAGGGCTCTCTCATTGCTGCTAACCCTATTCAACTAATAGTGGGGAGTTTCAAGCAAAACATCAGCAAGGAAATCAAAAGGAGACACTCTGCTATATCTTATGTTTCCTCCGACATTCCCAAAATGATAGAGGGCGAAACATCAGAACATGTGACAACAACTAACGGATTATCCGAGAATGCGATTATTCCTGCGACAGTTCCAGACAATGTGGACGTTGCTGCGACTCAGAACATGCACTCTCCTTCTTCTTCAAACGGACACAGCATGGACTCTCCGGACATGCATTCCGTTGCAGACCATGGACTGTCCATTGATATTGATATCAGTGAGCCTCGATTATGA 1017 0.5241 MEVKNGTANTESPADPPGTPTAKGCDAAPEVMGGEETSLSSVVVVGGGKSEVVGSEMMAVKKRRGRSRKHDVNGNLLSPASAPSPLGFADYSFGRCGKRSRGRPRGSGKLQLLASIGGVVADTAGGSFTPHVVTVNAGEDVVSKIVSFSQRGPRAVCILSATGAVSSVIIRQPSSSGGLLRFEGRFEIISLTGSYTSGDGGRRKSGMLSVSLANPDGKVFGGGVEGSLIAANPIQLIVGSFKQNISKEIKRRHSAISYVSSDIPKMIEGETSEHVTTTNGLSENAIIPATVPDNVDVAATQNMHSPSSSNGHSMDSPDMHSVADHGLSIDIDISEPRL 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1139 338 MobiDBLite consensus disorder prediction 300 338 - -
Bisa12g1139 338 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 246 - -
Bisa12g1139 338 MobiDBLite consensus disorder prediction 1 33 - -
Bisa12g1139 338 ProSiteProfiles PPC domain profile profile. 125 262 IPR005175 -
Bisa12g1139 338 MobiDBLite consensus disorder prediction 1 16 - -
Bisa12g1139 338 CDD DUF296 129 241 IPR005175 -
Bisa12g1139 338 Pfam Plants and Prokaryotes Conserved (PCC) domain 130 242 IPR005175 -
Bisa12g1139 338 Gene3D - 130 260 - -
Bisa12g1139 338 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 25 311 IPR039605 GO:0003680
Bisa12g1139 338 MobiDBLite consensus disorder prediction 300 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1139 Bisa-ChrBisa12 19140546 19147338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1139 60 241 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 48.990 1.59e-53 178