Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1135 ATGGATGGATTATCAAAAAAGGGTGGATTTAAAATAGAACTCTCCTTTCAACTAGTGGATAGTGAGGAGGAGGAGGAGGACCTTCCGTTAATGAACAAAGAGAATGGAAAACCAGATACAAAGAGTGAACTAGCTAAGGCTGTTGCAGCCAAAATCAATGTTTCCAAGGCTAATGATACAAAAAAGCAAGCCAAGGTCCTTCCTCCAAAGAAGGATGAAAACGAGGATTCTGAAGATGAGGATGATGATGATTCTGAAGACGAAGATGATGAACTTGGAAGTTCCGATGAGGATATGAAGGATGCTGGTGGTGATAGTGACGAGGAGAGTGAGGGTGATGAAGACGATGAGGAGACTCCTAAGAAGGGTAAGAAGAGACCTAATGATTCTGCAGCAAAAACTCCAGTTTCTGCCAAGAAGGCTAAAGCTGGTACTCCTCAAAAGACAGATGCCAAGAAAGGTGGTCATACAGCAACTCCCCACCCAATGAAGAAGGGTGGAAAGAGTCCTAACAGTGATTCCAAGTCTGGTGGACAATTGTCTTGCAAATCATGCAGCAAGACTTTCAACTCTGAAAGTGGTCTGCAACAACATAACAAGGCAAAGCATCAGTGA 615 0.4325 MDGLSKKGGFKIELSFQLVDSEEEEEDLPLMNKENGKPDTKSELAKAVAAKINVSKANDTKKQAKVLPPKKDENEDSEDEDDDDSEDEDDELGSSDEDMKDAGGDSDEESEGDEDDEETPKKGKKRPNDSAAKTPVSAKKAKAGTPQKTDAKKGGHTATPHPMKKGGKSPNSDSKSGGQLSCKSCSKTFNSESGLQQHNKAKHQ 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1135 204 MobiDBLite consensus disorder prediction 169 197 - -
Bisa12g1135 204 SUPERFAMILY beta-beta-alpha zinc fingers 169 202 IPR036236 -
Bisa12g1135 204 MobiDBLite consensus disorder prediction 74 116 - -
Bisa12g1135 204 MobiDBLite consensus disorder prediction 1 204 - -
Bisa12g1135 204 ProSitePatterns Zinc finger C2H2 type domain signature. 182 203 IPR013087 -
Bisa12g1135 204 ProSiteProfiles Zinc finger C2H2 type domain profile. 180 204 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1135 Bisa-ChrBisa12 19031367 19032951 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1135 127 203 C2H2 Transcription Factor Family AT5G03740 52.809 7.75e-18 77.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa12g1135 None None None