Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1134 ATGGTGGAGATGAGGAAGTCGGCTGACGATACGTTAGAATATGTGAAGATGTGCCAGAAGGAGGTGAGACTGGCGTTGAAGGACATAGTAGGGAGGGTCTATTTGAGAGAAAACATGAAGGTTGTGGGTTTTTTTAAGCCGGCCTTGTCCTCCATTTCATTTCTCGCTCTTGCAGTTTCAGCTCGATCTCGGTCTCGCTCCCTAAACCCTACCCGAGACCTCCCGCTGTCTCTTGCTGCTTCTTTCTCTGTACCTCCAATGGAATTCTGGGGTGTTGAGGTTAAGGTTGGGGAGTCTGTCAAAGTTGATCCCAGGGACTTTGATGCATACATACACCTATCACAGGCAAAGAAAGACAAGGGAGCTGAACCTGTGGTTCTTTACCTAAAATTTGATGACCAGAAATTTGTTTTGGGAACCCTTTCAAGGGAGAATTTCCCCCAAATATCGTATGACTTAGTTCTAGAAAAGGAGTTTGAGCTCTCCCACAACTCAAAAAATGGGAGCGTCTATTTTTGTGGATACAAAGCGGAAATCCCTGATGAAGAATATCCTTGA 558 0.4534 MVEMRKSADDTLEYVKMCQKEVRLALKDIVGRVYLRENMKVVGFFKPALSSISFLALAVSARSRSRSLNPTRDLPLSLAASFSVPPMEFWGVEVKVGESVKVDPRDFDAYIHLSQAKKDKGAEPVVLYLKFDDQKFVLGTLSRENFPQISYDLVLEKEFELSHNSKNGSVYFCGYKAEIPDEEYP 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1134 185 Gene3D Nucleoplasmin core domain 85 181 - -
Bisa12g1134 185 FunFam Histone deacetylase HDT1 87 181 - -
Bisa12g1134 185 Pfam Nucleoplasmin-like domain 89 175 IPR041232 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1134 Bisa-ChrBisa12 19029717 19031163 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1134 87 183 C2H2 Transcription Factor Family AT5G03740 48.515 3.32e-26 99.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1134 12 19029717 19031163 Bisa02g3578 02 87926031 87932722 CCT
Bisa12g1134 12 19029717 19031163 Bisa12g1134 12 19029717 19031163 ECH