Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1122 ATGGCTGACGGTGCGGCTGACGCCATGACTGAGACCCACCGAACTTCAAACCCTAGCGATGGAGCTGGACAAGGAAAGAAGCCGAAGGTGGTAGTGATAATGGGTCCCACTGGTTCTGGGAAGTCCAAGCTCGCCATTGATTTGGCCTCCCACTTCCCCATCGAAGTTATCAATGCTGATTCCATGCAGGTCTACCGAGGCCTTGATGTTCTCACCAACAAAGTTCCACTCTCGGACCAAAAGGGGGTGCCGCATCATCTTCTCGGTAACATAAGTCCAAACGTAGAATTCACAGCTAAAGAATTTCGGGATTCTGCTATTCCTCTCATAAATGACATATTGGTTCGTGACCGATTACCTGTAATAGTTGGGGGTACAAATTATTACATCCAGGCTCTTGTGAGTCCATTCCTTCTAGATGATTCAGTAGAAGATATGGATGAAATCTGTTTGAGCGACCCTGCTGGGATTACACAGTTGGATAAGAGTTTCATCCCCGAAAGGGATAGTTCAAACAAAAATTATGACCTGCTTAAAGATATTGATCCAGTTGCAGCAAATAGAATGCATCCAAATAACCACAGAAAGATTAGTCAATACCTTAGTTTGTATGCTCGCACTGGAGTTCTTCCTAGCACATTATTCCAAGGAAAGGCTGCAGAGAAGTGGGGTCAAGTTGATAACTTGAGATATGATTCCTGTTTTATATGCGTGGATGCATCTCTCCCTGTACTGGACAGATATGTGGAACAGAGGGTAGATTGCATGATGGATGCTGGATTACTTAATGAAGTCTATGAAGTTTACAATCCTCATGCAGATTACACTCTAGGCTTGCAGCAGGCCATTGGTGTACGTGAATTTGAGCCTCTTCTGAAAACCTGTGTAATTGATGACATCTACAAAAGAGAAAAGGAACTGACCGAGGATTCCAGCAGAGAAACGGGTGATAAGTTGTTTAATAATGATCTGAGGGAGCTATTGATGTCTTCTTCTGATACTAAATCCATAATTCTCTTGGAAGAAGCAATTGAAAAAGTAAAGGTTAATACACGAAGATTAGTTCGCCGTCAGAAGAGGATGCTTGATCGACTGCAAAAATTGTTTCGTTGGACTATACACTATGTTGATTCCACGGAATCATTATCAAGCAAATCAGATGATATATGGACAAACCAAGTGGTTGAACCTGCCATGAAAATGGTTAAATCTTTCCTTAGCAAGAATGAAAGCTTGTCATCCACGTTTGGGACATCAAATAGCAATGGGAAGAAGATAATTCAAAGGGACCTCTGGACTCAATATGTATGCAAGGCCTGTGGAGATAGGGTGCTTAGAGGGTCACATGAATGGGAACAACATATACAGGGTCGTGGACACCGGAAACGTATTTCTAGTCTCAAGAGCAAGTCACGAAGTCCTAGTTTTTTCTCAACCTACCCCACTTTGCAGAAAAGGGAGAGGAATTACAGTAGCAAATCAGTGCCGTCAAGTCTTCAGTCAATCTCCACCGCAGAAATCAGGGTGCCAATCGACGAAATGAAGTTGTGCTCCCACCTCGACCACTGCCGGCAAGGGAGTTTGCGACAACTGAAGCAGAGCATTTGGGAATCAGAGCATTTGGGAATTGGAGAGTGA 1638 0.4359 MADGAADAMTETHRTSNPSDGAGQGKKPKVVVIMGPTGSGKSKLAIDLASHFPIEVINADSMQVYRGLDVLTNKVPLSDQKGVPHHLLGNISPNVEFTAKEFRDSAIPLINDILVRDRLPVIVGGTNYYIQALVSPFLLDDSVEDMDEICLSDPAGITQLDKSFIPERDSSNKNYDLLKDIDPVAANRMHPNNHRKISQYLSLYARTGVLPSTLFQGKAAEKWGQVDNLRYDSCFICVDASLPVLDRYVEQRVDCMMDAGLLNEVYEVYNPHADYTLGLQQAIGVREFEPLLKTCVIDDIYKREKELTEDSSRETGDKLFNNDLRELLMSSSDTKSIILLEEAIEKVKVNTRRLVRRQKRMLDRLQKLFRWTIHYVDSTESLSSKSDDIWTNQVVEPAMKMVKSFLSKNESLSSTFGTSNSNGKKIIQRDLWTQYVCKACGDRVLRGSHEWEQHIQGRGHRKRISSLKSKSRSPSFFSTYPTLQKRERNYSSKSVPSSLQSISTAEIRVPIDEMKLCSHLDHCRQGSLRQLKQSIWESEHLGIGE 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1122 545 NCBIfam tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA 30 300 IPR018022 GO:0008033
Bisa12g1122 545 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 27 406 IPR039657 -
Bisa12g1122 545 Gene3D - 28 430 IPR027417 -
Bisa12g1122 545 MobiDBLite consensus disorder prediction 1 27 - -
Bisa12g1122 545 FunFam tRNA dimethylallyltransferase 430 473 - -
Bisa12g1122 545 Pfam IPP transferase 63 360 - -
Bisa12g1122 545 Hamap tRNA dimethylallyltransferase [miaA]. 30 407 IPR018022 GO:0008033
Bisa12g1122 545 Gene3D Classic Zinc Finger 431 475 - -
Bisa12g1122 545 Gene3D - 158 218 - -
Bisa12g1122 545 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 26 273 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1122 Bisa-ChrBisa12 18822097 18833953 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1122 17 469 C2H2 Transcription Factor Family AT2G27760 56.494 5.31e-177 505