Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1113 ATGGAGCTCGAGGATCTCGCCGACGACCTCCAGAGTCTAAGTTTCGCCTCCACCACCACCACCACAGACATCAAACGCAGCACGAGCTCCGGCTCCGAGACCACTACTCTAACTGCTTCCACATCCGCCCACCTAGCTCCACTCCCACACCCCGCAACTAAACCCCACGCGCCTTCCTCGGACCCTTGCTGGGCTGCCATAAACCGGATCCGATCGGAGTCCCCGAGCCGCCACATCGCCTCCTCCGACCTGCGGTTCAACCATCGGCTGGGCTCCGGCGACATAGGCTCTGTCTACCTCGCGGAGCTCAACAATGGCGAGGAGGGGAGCGTGCTGTTCGCGGCGAAAGTGATGGACAAGAAGGAGCTCGCGAGTCGCAGCAAGGAAGGGAGGGCGAGGACAGAAAGGGAAATTCTCGAATTGCTAGACCACCCCTTCCTTCCCACTCTCTACGACACCATCGACGCGCCCAAATGGATCTGCCTCCTGACCGAGTTCTGCCCTGGCGGTGACCTCCACGTGCTCCGGCAACGCCAGCCCAACAAGCGCTTCCATGAGCCCGCCGTCAGGTTTTACGCATCGGAGGTGGTGGTGGCTCTGGAATACCTTCACATGTTGGGGATAGTGTATCGCGACCTCAAGCCCGAGAACGTGTTAGTCCGATCGGACGGCCACATCATGCTTACCGACTTTGACCTCTCGTTAAAAGGCGATGATTCCGTATCAACGGCTCAGATCATTTCTGAGCAAAACCCCCTTCCCTCGGCCCCTCACAACAAAGATTCCCACATTGACCCTCCTCCTTTCACCTCCTCGTCCTGCATCTTACCCAACTGTATAGTCCCTGCCGTGTCCTGCTTCCACCCAAAACGCAAGCGCAAGAAGAAGCAGAGCCTGCGTAATGGGCCCGAGTTTGTGGCCGAGCCCATTGACGTCCGGTCCATGTCATTCGTAGGGACCCACGAGTATTTGGCCCCGGAGATCGTGTCCGGCGAGGGACACGGTAGTGCGGTGGACTGGTGGACGCTGGGGGTATTTATATTTGAGCTGTTTTACGGACTGACGCCGTTTAGGGGGTTGGACAATGAGTTAACCCTGGCTAACATCGTGGCTCGAGCCCTCGAGTTTCCCAAAGAGCCCGCCGTGCCGGCCACGGCGAAGGACCTTATTTCGCAATTGTTGGTGAAGGACCCGACGAGGCGGCTCGGGTCGAAGATGGGGTCGTCGGCGATCAAGCACCATCCCTTTTTTCAAGGTGTGAATTGGGCTTTGTTGAGATGTACGCCTCCTCCTTTTGTGCCCCCACCTTACAGTAAAGAAACTGTATCTGATGAAAGTTGTCCCGAGACTCCTATTGATTATTACTGA 1368 0.5731 MELEDLADDLQSLSFASTTTTTDIKRSTSSGSETTTLTASTSAHLAPLPHPATKPHAPSSDPCWAAINRIRSESPSRHIASSDLRFNHRLGSGDIGSVYLAELNNGEEGSVLFAAKVMDKKELASRSKEGRARTEREILELLDHPFLPTLYDTIDAPKWICLLTEFCPGGDLHVLRQRQPNKRFHEPAVRFYASEVVVALEYLHMLGIVYRDLKPENVLVRSDGHIMLTDFDLSLKGDDSVSTAQIISEQNPLPSAPHNKDSHIDPPPFTSSSCILPNCIVPAVSCFHPKRKRKKKQSLRNGPEFVAEPIDVRSMSFVGTHEYLAPEIVSGEGHGSAVDWWTLGVFIFELFYGLTPFRGLDNELTLANIVARALEFPKEPAVPATAKDLISQLLVKDPTRRLGSKMGSSAIKHHPFFQGVNWALLRCTPPPFVPPPYSKETVSDESCPETPIDYY 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1113 455 SMART serkin_6 84 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1113 455 FunFam serine/threonine-protein kinase D6PK-like 312 435 - -
Bisa12g1113 455 PANTHER FLIPPASE KINASE 1-RELATED 25 439 - -
Bisa12g1113 455 FunFam serine/threonine-protein kinase D6PKL2 83 170 - -
Bisa12g1113 455 SUPERFAMILY Protein kinase-like (PK-like) 67 443 IPR011009 -
Bisa12g1113 455 Gene3D Transferase(Phosphotransferase) domain 1 313 435 - -
Bisa12g1113 455 FunFam serine/threonine-protein kinase D6PK-like 171 238 - -
Bisa12g1113 455 ProSitePatterns Serine/Threonine protein kinases active-site signature. 208 220 IPR008271 GO:0004672|GO:0006468
Bisa12g1113 455 MobiDBLite consensus disorder prediction 19 60 - -
Bisa12g1113 455 MobiDBLite consensus disorder prediction 19 43 - -
Bisa12g1113 455 Gene3D Transferase(Phosphotransferase) domain 1 171 246 - -
Bisa12g1113 455 Gene3D Phosphorylase Kinase; domain 1 83 170 - -
Bisa12g1113 455 ProSiteProfiles Protein kinase domain profile. 84 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1113 455 Pfam Protein kinase domain 314 417 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1113 455 Pfam Protein kinase domain 87 241 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1113 Bisa-ChrBisa12 18344751 18349523 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1113 3 455 AGC Kinase Gene Family AT3G44610 66.164 0.0 578
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Bisa12g1113 Pkinase 3.7e-33 CL0016