Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1112 ATGAAGCGTGTCAACAACAAAACTCCATCTAAGCCTTTTGCCGCCCCCCTCCCCCCACTTGAGGAGTATCAATCCAAAGCTTATTTTGAAGAAACCCTAAGAGCATCAAAGCACGTCATTCTAGCAAAAATGAAGGTGATCGCTGCTTATTTGTTGGCCGTCTTGGGAGGGAACACAAGCCCTTCAGCCGACGATTTGAAGGACATCCTTGGCTCAGTTGGAGCTGAGTGTGATGATGAAAGAATTGAGTTACTCTTGTCTGAGGTCAAGGGAAAAGATATCACAGAGCTAATTGCTGCTGGAAGAGAGAAGTTGGCTTCAGTGCCATCTGGTGGTGGTGCAGTAGCTGTTGCTGCACCAGCTGCAGGTGGTGCTGCTGGTGGTGGCGCTGCACCTGCTGCTGAGGCAAAGGAGGAAAAGAAGGTGGAAGAGAAGGAGGAATCTGATGATGATATGGGTTTCAGTTTATTCGACTAA 477 0.4843 MKRVNNKTPSKPFAAPLPPLEEYQSKAYFEETLRASKHVILAKMKVIAAYLLAVLGGNTSPSADDLKDILGSVGAECDDERIELLLSEVKGKDITELIAAGREKLASVPSGGGAVAVAAPAAGGAAGGGAAPAAEAKEEKKVEEKEESDDDMGFSLFD 158
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1112 158 CDD Ribosomal_P2 44 158 IPR044076 GO:0002182|GO:0003735|GO:0022625
Bisa12g1112 158 MobiDBLite consensus disorder prediction 134 148 - -
Bisa12g1112 158 MobiDBLite consensus disorder prediction 122 158 - -
Bisa12g1112 158 Pfam 60s Acidic ribosomal protein 60 157 - -
Bisa12g1112 158 Gene3D - 43 102 IPR038716 -
Bisa12g1112 158 FunFam 60S acidic ribosomal protein P2 42 102 - -
Bisa12g1112 158 Hamap 50S ribosomal protein L12 [rpl12]. 45 158 IPR027534 GO:0003735|GO:0005840|GO:0006414
Bisa12g1112 158 PANTHER 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER 44 158 IPR044076 GO:0002182|GO:0003735|GO:0022625
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1112 Bisa-ChrBisa12 18324389 18325985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1112 44 158 Cytoplasmic Ribosomal Protein Gene Family AT3G44590 68.696 2.46e-34 114