Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1111 ATGAACGGCGGAAGCTGGAGACGAGACAGGAGAGACCCCCGTAGATCCAAGAAGCAAAAGCTAATCCGCAACGCTGAGGAAGAAATCGAGTCTAAGTTAGGGTTCGATCATTTCTCAGAGGGTGAAAAACGTCTTGGATGGTTGCTCAATTTTTCATCCTCATCTTGGGAGGATGAAGATACAAACAAAGTCTTTAGTTGTGTAGATCTTTATTTTGTTACACAGGATGGTTCTACGTTCAAGACAAAGTACAGGTTTCACCCCTATTTCTATGTGGCTACAAAGGATAAAATGGAGCTGGATGTTGAAGCATATCTGAGACGGCGTTATGAAAGTCAAATTGCAGATATTGAAATTAAAGAGAAGGAAGACCTTGATCTTAAAAATCATTTGTCTGGATTACGGAAATCTTATTTAAAGCTATCCTTTGATACTGTACAACAATTGATGAATGTGAAGAGTGATCTGATGCATGTTGTTGAAAGAAATCAGGCAAAATCTGATGCAGCAGAAGCTTATGAGTCCATATTAACAGGAAGAAGGGAACAAAAACCTCAAGATTTTCTAGATTGCATAGTTGATCTTCGTGAATATGATGTTCCTTATCATGTTCGCTTTGCGATCGATAATGATATACGGTGTGGCCAATGGTATGATGTTAGTGTGTCCAATGCTGGGGTTACACTTGAGAAGAGGACAGATCTTCTGCAGCGTGCTGAAGTTCGTATTTGTGCGTTTGACATAGAGACCACCAAACTTCCATTAAAGTTCCCTGATGCTGACTATGATTTAATTATGATGATTTCATACATGATAGATGGACAAGGGTATTTAATCATAAACAGAGAGTGTGTTGGGGATGATATAGAAGATTTGGAGTACACTCCAAAACCAGAGTTTGAAGGGTGTTTTAAGGTGACAAATGTTCAAAATGAGGTTGAGCTTCTTAGATTGTGGTTTTCCCATATGCAAGAGGTGAAACCTGGAATCTATGTGACATATAACGGTGATTTCTTTGATTGGCCATTTGTGGAAAGAAGGGCAGCCCATCATGGGTTTAAAATGAGTGATGAGTTGGGTTTTCAATGCGACAATAATCAAGGGGAATGTCGAGCTAAGTTTGCTTGCCATTTAGATTGTTTTGCTTGGGTTAAACGAGATAGTTATCTCCCTCAGGGGAGCCAAGGCCTGAAGGCTGTTACAAAAGCAAAGTTGGGTTATGATCCCCTAGAGGTGAACCCTGAGGACATGGTTCGCTTTGCAAAGGAAAAGCCTCAGATGATGGCCTCCTATTCTGTTTCTGATGCTGTGGCAACTTATTACTTATATACAACCTATGTTCATCCCTTTATTTTTTCTCTTGCAACAATTATCCCCATGTCACCAGATGAGGTTTTGCGAAAAGGTAGTGGGACACTCTGTGAAATGTTGCTCATGGTCCAGGCACACAAAGCCAATGTGATCTGCCCTAACAAACACCAATCTGATCCAGAGAAATTTTACAACAATCATCTTCTTGAGAGTGAGACATACATAGGTGGACATGTGGAGTGCCTTGAAAGTGGTGTATTTAGATCTGATATTCCAACTAGTTTTACACTCGAACCATCAGCATATGAGCAATTGATCAACAACCTTGATCGAGACCTGCAATATGCTATAAGAGTAGAGGGTAAGATGGACTTGGATTCTGTCTCTAATTATGATGAAGTGAAGAATGCTATCATGGAAAAGCTTATAAAATTGCGAGATGAGCCAATACGTGAAGAATGTCCCCTCATTTATCATCTGGATGTAGCTGCTATGTATCCAAACATAATCTTAACAAACCGTCTTCAGCCACCTTCAATAGTTACAGATGAGATCTGCACTGCATGTGATTTCAATCGTCCTGGAAAGACCTGCCTTCGGAAACTTGAGTGGGTTTGGCGTGGAGAAGTATTCATGGCAAAGAAAAGTGATTATTATCATATAAAGAAGCAGATTGAGTCAGAGTTTGTTGAAGGAGCTGATAAACAGTCTTCAAAATCATTTCTTGACCTGCCCAAGTCAGAGCAACAATCCAGGCTAAAGGAGCGTCTAAAGAAATACTGCCAAAAGGCATATAAACGGGTAATTGACAAGCCAGTAACTGAACTCCGTGAAGCAGGGATTTGCATGCGTGAAAATCCATTTTATGTTGACACTGTCCGCAGTTTTCGAGATAGAAGATATGAATACAAAGGTCTTAATAAGGTTTGGAAGGGAAAGTTGTCAGAAGCCAAGGCCAGTGGAAATTCTATAAAGATCCAGGAAGCACAAGACATGGTAGTGCTCTATGATTCATTGCAACTTGCGCACAAGTGTATACTTAATTCCTTTTATGGATATGTCATGCGTAAGGGAGCAAGATGGTACTCCATGGAAATGGCTGGAGTAGTCACATATACTGGTGCAAAAATCATTCAGAATGCCCGCTTGCTGGTAGAGAAAATAGGAAAGCCACTTGAATTAGACACAGATGGTATCTGGTGTGCACTTCCTGGATCTTTTCCAGAGAATTTCACTTTTAAAACAAAAGACTCAAAGAGGAAATTGACTATCTCATACCCTTGTGTCATGCTTAATGTTGATGTGGCAAGGAATAACACAAATGATCAGTACCAGACACTTGCAGATCCAATTAGGAAAACTTATACAACTCATAGTGAATGCTCTATTGAATTTGAAGTGGATGGACCATATAAGGCAATGATCCTTCCTGCTTCCAAGGAAGAAGGAATTCTAATTAAGAAGCGTTATGCCGTTTTTAATGATGATGGAACCCTAGCAGAGCTGAAGGGTTTTGAGATCAAGCGCAGAGGTGAACTGAAGCTAATAAAAGTTTTCCAGGCTGAGCTTTTTGACAAGTTTCTCCATGGGTCAACCATAGAGGAATGCTATTCAGCTGTCGCTTCTGTGGCAAACCGCTGGCTTGATCTTCTTGATAACCAAGGAGAGGACATTGCAGATAGTGAGTTGCTTGATTATATATCAGAATCAAGTACCATGAGCAAGTCATTAGCTGATTATGGTGAGCAGAAGTCTTGCGCTGTTACCACTGCCAGACGGCTTGCTAACTTTCTTGGTGATACAATGGTCAAAGATAAAGGCCTCCGCTGTCAGTACATTGTAGCATGTGAACCTAAGGGAACTCCTGTAAGCGAGCGTGCCATCCCTGTGGCAATATTTGAAACCGATGCTGAAGTAATGAAGTTCTATGTACGAAAATGGTGCAAGGTTTCATCTGATGTTGGCATTCGGTCCATAGTTGACTGGTCCTATTACAAGCAGCGGCTGGGCTCGGCGATTCAAAAAATTATCACTATTCCTGCTGCAATGCAAAAGGTTGCAAATCCTGTCCCCAGGGTGATTCATCCTGATTGGTTGCATAAAAAGGTCCGTGAGAAGCAGGACAAGTTTCGCCAACGAAAATTAGTTGATGTCTTCAACTCCATGAAGTGGGATGAAAACTCTAAAAAGCATAGTAATTCTAATAATGTCTGCCAAGTGAAGGATGGAGAGAACATTAATGACTTGGAGGACTTTGGAAACAAGACCAGGAGCAATATTAGTGGACCTAGACCAATTGTACGACATTATGAAGCTAATAATGAACAGGATTCAGTGAAGCCTCATGCCAAAGAAGATTCTGAGCACCATCAAAGTAGTGAGCGTCAGCCGCTTTCACAATTACAACAAAATGGATTGTCATCTGAAAATGTTGACAGAACCGTAGATTATCAAGGATGGCTTCAGACAAAGAAGAGAAAGTGGAAAGATATAATAACAAGAAGAAAGAAGCAAAGATTGGAGAATTCAAAGAAATCAGACTGTGCTAGTGGCACTCTAGAAAGACTGAGTAATAAGATGGATCATAAAGCCCAGGGAAGAAGTAATGTTGATTCGTATTTCAGAAGGCACGAGGTAGTTTTGACACGGTCCCACTGGCAGATAATACAGCTAATTCATAGTTCACAGATCGGTCAATATTTTGCTTGGGTTGTTGTTGATGGGGTTATGCTTAAGATTCCAGTTTCTGTTCCTAGAGTCTTTTATCTCAATTCTAGATCACCTATCACTGAACAGTTTCTGGGTAAGCGTGTCAACAAGACTCTTCCACATGGAAAGCTTAGTTATAACCTGTATGAGGTTACAATTGATGAAGTTCAATTCAAAGAAACAAGCAAAAAGCTTGCAGCTCTTCTAGCAGATCCTGATGTTGAGGGAATATATGAAACGAAAGTGCCACCGGAGTTAAGAGCCATAGTCCAGCTTGGTTGTGTATGTAAAGTGGACAAAACTGCTAAAAAACGTAGTCTACAGGAACCTTGGAGTGTGAGTGAATTGCACATGAAGACCACTACAGAATGTGCTTATCTCAAGCAATCCATATCCTTCTTTTACTTGTATCACAGCATATCTGAGGGGCGAGCTATATATGTTGGATATTTTCCTGCATCAAAAGCAATATCTGTTGTGGTAGTTAATCCCTATCAAAACAAAGACTTATCTCCAGTTTTTCTTGAAAGACAATTTCGTGATGCTTGCCAAGCTTTGTCTATTGAGGCACCTCCCAGAAATGGTTTTAATTTTAAGGTGGACTATGTTGTGCTTGTCAAGGATGCTGAAACAATGGTGCAAAGAGCAATAAGTGATCACAGGAATGAGCATCATGGACCTATGGTTGCTGTCATTGAATGTCCAAATCCCCAACTAATGAAATTGGCTATTCAAGCTCTAGATGACTTCCCATGCCTAAACATTCCTTCTAATGCACGTGATAGTCAGTATCAGATTCTTGGATGGCAACAAGTTGCTGCAAAGATTGGAATGCAACGCTGTGCTGCATCACTCCAGTGGCTAGATGAGAGAATTTCTCTCTCAAGATATGCCCATGTACCATTGGGTAATTTCGAACTTGACTGGCTTATATTTACAGCAGATATCTTCTTTTCAAGAGCATTGATTGATAATCAACAGGTACTTTGGATATCTGATGATGGCATTCCAGATTTAGGTGGAATTATTGAAGAAGAGACATGTTTTGCTGATGAGGTCCACCAACCTGTTCTTACCTATCCTGGAGCTTACAGAAAAGTTACAGTGGAGCTAAAGATTCACCACCTGGCTGTGGATGCTCTTCTGAAAAGCAACCAAGTTAATGAATTGGAAGGAGGTGCTTTGTTAGGATTTGATCATGACTTCAACTCTGGACCATTTTCCATAAATGACCAGATTGGCTTTGATGAGGCTACCTCTTGTGCACATGCTTTTCGAGTCCTAAAGCAGTTGATCCAGCGGTGCCTTGCAGATGCAGTTACATCTGGAAATGTATATGCTGATGCAATATTGCAACATCTATATCGATGGCTATGCAGCCCTCAGTCAAAACTTCATGATCCAGCTCTTCACCAGTTACTCCACAAGGTCATGCAAAAGGTCTTTGCTCTGCTGTTGGCGGAGTTCCGGAAATTGGGTGCAACTATTATTTTTGCAAACTTCTCGAAAATCATTGTAGACACGGGAAAATATGATCTGTCTGCAGCCAAAGCTTACTGCGATAGTTTGTTACAAACTATACAATCTAGAGATTTATTTGAATGGATTGAGCTTGAACCACTGCAGTTCTGGCATTCATTGCTATTCATGGATCAGTATAACTATGGTGGAATACCAGCAAAGTCCGATGAAGCTATAAATGATGAATCTCAAGTTGACATTATATCAAGTTGGAACATTGCCGAATACTTGCCAAAGAAAATCCAGGACCACTTTGTTTTCATTGTTTCTCAATTCATGTACATTCCCTGGAACTATGCACAAAAACAAGCTGCAATACAGGCTTCATTGCAAAATGGCGACTCCTGCACCCCGTCAATTACTATTGGAGCTGCAGAGAATTTTGAATCACAAATGACAGAATGTATTAAGGGGCAGATCAGCACTTACTTCGCGGACAAACTTCTTGGAATTGTTCGTGATATTATGCTTCATATGAAGGAGATGAGATCAGTAAATGATCAGAATGTATCATCTGGCAATCCCCAACTTGCCGGTGATCTCCACAGAGGGGATGCAGCCTTGGAATTTATCAAGCATGTCTGTGCTGTTCTTGCCCTGGACCAGAATGTGCAGCATGATGTTCTGGTTATGAGGAAGAACTTGTTGAGATATATTCGTGTCAGGGAGTTTGCTCCAGAAGCCGAGTTTCGTGATCCGAGTCATTCCTTCATCTTACCCAATGTCATTTGCAGCTACTGTAATGATTGCAGAGACCTGGACTTGTGCCGTGACTCAGCTTTACTGAGTCAGGAGTGGCATTGTGGCGTCCCGCAGTGTGGGCAGCCATACGACCGTGCGGTGATGGAAAATGCACTTCTTCAGATAGTTCGACAGAGAGAACGGCTGTACCACTTGCAAGATCTGGTGTGTATCAGGTGCTACCAGGTGAAAGCTGCACATTTAGCTGAGCAATGTGCATGTGCTGGATCATATAAATGCAAGGAAGACATAACTGAATTTCGTACCAAGATGCAAGTTTTCTTTAACATAGCTGTTCGCCAAAAGTTCCAACTTCTTCAAGAATGCACTGCATGGATTTTAGAACTTAGATAG 6636 0.4103 MNGGSWRRDRRDPRRSKKQKLIRNAEEEIESKLGFDHFSEGEKRLGWLLNFSSSSWEDEDTNKVFSCVDLYFVTQDGSTFKTKYRFHPYFYVATKDKMELDVEAYLRRRYESQIADIEIKEKEDLDLKNHLSGLRKSYLKLSFDTVQQLMNVKSDLMHVVERNQAKSDAAEAYESILTGRREQKPQDFLDCIVDLREYDVPYHVRFAIDNDIRCGQWYDVSVSNAGVTLEKRTDLLQRAEVRICAFDIETTKLPLKFPDADYDLIMMISYMIDGQGYLIINRECVGDDIEDLEYTPKPEFEGCFKVTNVQNEVELLRLWFSHMQEVKPGIYVTYNGDFFDWPFVERRAAHHGFKMSDELGFQCDNNQGECRAKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVRFAKEKPQMMASYSVSDAVATYYLYTTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLMVQAHKANVICPNKHQSDPEKFYNNHLLESETYIGGHVECLESGVFRSDIPTSFTLEPSAYEQLINNLDRDLQYAIRVEGKMDLDSVSNYDEVKNAIMEKLIKLRDEPIREECPLIYHLDVAAMYPNIILTNRLQPPSIVTDEICTACDFNRPGKTCLRKLEWVWRGEVFMAKKSDYYHIKKQIESEFVEGADKQSSKSFLDLPKSEQQSRLKERLKKYCQKAYKRVIDKPVTELREAGICMRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKTKDSKRKLTISYPCVMLNVDVARNNTNDQYQTLADPIRKTYTTHSECSIEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAELFDKFLHGSTIEECYSAVASVANRWLDLLDNQGEDIADSELLDYISESSTMSKSLADYGEQKSCAVTTARRLANFLGDTMVKDKGLRCQYIVACEPKGTPVSERAIPVAIFETDAEVMKFYVRKWCKVSSDVGIRSIVDWSYYKQRLGSAIQKIITIPAAMQKVANPVPRVIHPDWLHKKVREKQDKFRQRKLVDVFNSMKWDENSKKHSNSNNVCQVKDGENINDLEDFGNKTRSNISGPRPIVRHYEANNEQDSVKPHAKEDSEHHQSSERQPLSQLQQNGLSSENVDRTVDYQGWLQTKKRKWKDIITRRKKQRLENSKKSDCASGTLERLSNKMDHKAQGRSNVDSYFRRHEVVLTRSHWQIIQLIHSSQIGQYFAWVVVDGVMLKIPVSVPRVFYLNSRSPITEQFLGKRVNKTLPHGKLSYNLYEVTIDEVQFKETSKKLAALLADPDVEGIYETKVPPELRAIVQLGCVCKVDKTAKKRSLQEPWSVSELHMKTTTECAYLKQSISFFYLYHSISEGRAIYVGYFPASKAISVVVVNPYQNKDLSPVFLERQFRDACQALSIEAPPRNGFNFKVDYVVLVKDAETMVQRAISDHRNEHHGPMVAVIECPNPQLMKLAIQALDDFPCLNIPSNARDSQYQILGWQQVAAKIGMQRCAASLQWLDERISLSRYAHVPLGNFELDWLIFTADIFFSRALIDNQQVLWISDDGIPDLGGIIEEETCFADEVHQPVLTYPGAYRKVTVELKIHHLAVDALLKSNQVNELEGGALLGFDHDFNSGPFSINDQIGFDEATSCAHAFRVLKQLIQRCLADAVTSGNVYADAILQHLYRWLCSPQSKLHDPALHQLLHKVMQKVFALLLAEFRKLGATIIFANFSKIIVDTGKYDLSAAKAYCDSLLQTIQSRDLFEWIELEPLQFWHSLLFMDQYNYGGIPAKSDEAINDESQVDIISSWNIAEYLPKKIQDHFVFIVSQFMYIPWNYAQKQAAIQASLQNGDSCTPSITIGAAENFESQMTECIKGQISTYFADKLLGIVRDIMLHMKEMRSVNDQNVSSGNPQLAGDLHRGDAALEFIKHVCAVLALDQNVQHDVLVMRKNLLRYIRVREFAPEAEFRDPSHSFILPNVICSYCNDCRDLDLCRDSALLSQEWHCGVPQCGQPYDRAVMENALLQIVRQRERLYHLQDLVCIRCYQVKAAHLAEQCACAGSYKCKEDITEFRTKMQVFFNIAVRQKFQLLQECTAWILELR 2211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1111 2211 MobiDBLite consensus disorder prediction 1 22 - -
Bisa12g1111 2211 FunFam DNA polymerase epsilon catalytic subunit 756 937 - -
Bisa12g1111 2211 Pfam Domain of unknown function (DUF1744) 1531 1898 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Bisa12g1111 2211 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 16 2209 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Bisa12g1111 2211 MobiDBLite consensus disorder prediction 1231 1245 - -
Bisa12g1111 2211 Gene3D - 238 468 IPR036397 GO:0003676
Bisa12g1111 2211 Gene3D Palm domain of DNA polymerase 753 937 IPR023211 -
Bisa12g1111 2211 Gene3D - 941 1125 IPR042087 -
Bisa12g1111 2211 SMART DUF1744_2 1514 1898 IPR013697 GO:0003887|GO:0005634|GO:0006260|GO:0008270
Bisa12g1111 2211 Pfam DNA polymerase family B, exonuclease domain 74 400 IPR006133 -
Bisa12g1111 2211 MobiDBLite consensus disorder prediction 1209 1230 - -
Bisa12g1111 2211 MobiDBLite consensus disorder prediction 1209 1245 - -
Bisa12g1111 2211 Gene3D DNA Polymerase, chain B, domain 1 50 231 - -
Bisa12g1111 2211 CDD DNA_polB_epsilon_exo 240 443 - -
Bisa12g1111 2211 SUPERFAMILY Ribonuclease H-like 59 467 IPR012337 -
Bisa12g1111 2211 CDD POLBc_epsilon 503 1122 - -
Bisa12g1111 2211 FunFam DNA polymerase epsilon catalytic subunit 56 227 - -
Bisa12g1111 2211 Pfam DNA polymerase family B 756 1064 IPR006134 GO:0000166|GO:0003677
Bisa12g1111 2211 FunFam DNA polymerase epsilon catalytic subunit 941 1125 - -
Bisa12g1111 2211 SUPERFAMILY DNA/RNA polymerases 469 1143 IPR043502 -
Bisa12g1111 2211 SMART polmehr3 239 842 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bisa12g1111 2211 FunFam DNA polymerase epsilon catalytic subunit 240 468 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1111 1 2101 Core DNA Replication Machinery Family AT1G08260 72.317 0.0 3109