Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1094 ATGATTATCGATCTGATCGGAAGCGAGAGAGAAAGGGTGAAAAGCAAAGATGATGATCAGAGAAGGTTTTGTAAGTCAAAAAGGCCTTTGAATGGAGGAGGGTGGCGTAAGCAACGCCACACGAAGAAGATTCTGTGTAGGAACATTAGGAATACAAATTTTGGAATACGTCATGGTTGGGAGATCTCTGAGAGCGAGTCGGAAAAAACAGAAAGACGATCAGAGATAATGGCGGAAGAACATCGATGCCAAGCTCCACGCCTCTGTGCCAATAACTGCGGCTTCTTTGGCAGCCCGGCGACGCAAGATCTATGTTCCAAGTGCTACAGAGATTTGCAGCTTAAAGAACAACAATCCTCCTCTGCCAAGTTGGTTCTCAACCAATCGCTCTCTTCTCCGTCTCCGAAGACCTGGAAACCGTCTCCTTCGTCTGAACCGATTGCCACCGTTCCTTCACCTTCTGCGGGACCTGATTCGCCACGTGCCGTTAACGAAGGAAACATCGGAACCCCGGCGCAGCCACAGCCCCAGCAGAGCCGGTGCTTAACATGCAGGCGGCGCCTGGGTCTCACGGGATTCAAGTGCCGGTGCGGGTTCACGTTCTGTGGGTCCCACCGATACCCGGAACAGCACAAATGTGATTTCGACTTCAAGAGTATGGACAGGGAGCAGATCGCGAAGGCTAATCCGGTGGTGAAGGCCGATAAACTCGAGAGGATCTGA 723 0.5159 MIIDLIGSERERVKSKDDDQRRFCKSKRPLNGGGWRKQRHTKKILCRNIRNTNFGIRHGWEISESESEKTERRSEIMAEEHRCQAPRLCANNCGFFGSPATQDLCSKCYRDLQLKEQQSSSAKLVLNQSLSSPSPKTWKPSPSSEPIATVPSPSAGPDSPRAVNEGNIGTPAQPQPQQSRCLTCRRRLGLTGFKCRCGFTFCGSHRYPEQHKCDFDFKSMDREQIAKANPVVKADKLERI 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1094 240 Pfam AN1-like Zinc finger 183 217 IPR000058 GO:0008270
Bisa12g1094 240 SMART AN1_Zf_4 181 218 IPR000058 GO:0008270
Bisa12g1094 240 ProSiteProfiles Zinc finger A20-type profile. 83 117 IPR002653 GO:0003677|GO:0008270
Bisa12g1094 240 SMART A20_3 86 110 IPR002653 GO:0003677|GO:0008270
Bisa12g1094 240 Pfam A20-like zinc finger 87 110 IPR002653 GO:0003677|GO:0008270
Bisa12g1094 240 SUPERFAMILY Glucocorticoid receptor-like (DNA-binding domain) 88 137 - -
Bisa12g1094 240 Gene3D - 158 236 IPR035896 -
Bisa12g1094 240 SUPERFAMILY AN1-like Zinc finger 170 235 IPR035896 -
Bisa12g1094 240 ProSiteProfiles Zinc finger AN1-type profile. 175 221 IPR000058 GO:0008270
Bisa12g1094 240 MobiDBLite consensus disorder prediction 125 150 - -
Bisa12g1094 240 PANTHER AN1-TYPE ZINC FINGER PROTEIN 85 240 - -
Bisa12g1094 240 MobiDBLite consensus disorder prediction 125 177 - -
Bisa12g1094 240 FunFam Zinc finger AN1-type containing 6 158 236 - -
Bisa12g1094 240 Gene3D - 75 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1094 Bisa-ChrBisa12 17747597 17756195 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1094 77 240 C2H2 Transcription Factor Family AT3G52800 52.326 9.40e-46 149