Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1088 ATGTTTGGATCAATGAGCATGGACGAATTCCTCGCCAACATTTGGAATTCCGATTGTAACCAGATCGATTCACTACCGCCGCCGCCTCCTCCTCCGCTGATACAGCGGCCTCCTCCGCCGATGCCGGCGGCCACCCACGGTGAATCAGCTGTTCAGAACAAAAACGCCGGTGCAGCAACAGAACCCTCTGTTTCTCAAATAGCCTCAATCTCTGTTCCGCCCCCATTTTGCAAGAAAACTGTGGATGAGGTTTGGTGTGAGATCCAGAAAGACCGAAAGCCACAGAAAAAAGAAGTTAATGGTCTAATTAGCAACAATGAGAGCCTCCAGAAGGTAGAAACACTTGGGGTAATGACTCTGGAGGATTTCCTGATAAAAGCTGGGGTTGTACAAGAATCATCATCGCCAATGAAGTCTTCTTCGCCTGGACAAAGACCATCATCGTCCTTGCCAATTCAGAACCAAGCGGGGAATATGGCAAATAATAGACCACTTGATGCGACTAATAAAATGGTATCTGCAACTAGGGTGGGAATTTCAACCCAGGTGGTCTCTCAGAGTCATAGCTTGGCAGTGAAAGATCCCGCTTCTAGTAGTGCTGTTAAGAAATGCCAAAAATCAACAGAGCCAAGTGGGAATAGTAGCAGGAAGAGGATAATCGATGGCCCCCCTGAAGTGCTGGTGGAGAGAAGGCAGCGCAGGATGTTGAAGAATCGAGAATCGGCTGCACGTTCTCGAGCAAGAAAACAGGCATATACAGTGGAGTTAGAAGCAGGACTGAATCGACTCAGACAAGAGAACGAAAAGCTGAAAGAAATTCTGGCTGAAGATGAGCGGAAGAGGAAAGAAGAGGAAGCATTCGACAATGGCTCAGAGAAGAACAGAGAAGATGAGGGCTATAAGGAGGACAGTGAGTGTTGCGTGGTGAACGATGAAAGCGTCAACCACCGAGGGATGAGGCATGTAGTTAGTGTATACATGATGCTTGCTGACATGGCAAGCGAATCACCTGATGACGAGGACATGGATGACAGCCGAAAACCGAATGGCAGCAAGGCAATAGGGGACTACGAAGGAGCTGACAGGAAGAATAATAGAAAGATTCGAAGTGAGAAAAAGATGAGGGGCTCACCATACTGA 1140 0.4789 MFGSMSMDEFLANIWNSDCNQIDSLPPPPPPPLIQRPPPPMPAATHGESAVQNKNAGAATEPSVSQIASISVPPPFCKKTVDEVWCEIQKDRKPQKKEVNGLISNNESLQKVETLGVMTLEDFLIKAGVVQESSSPMKSSSPGQRPSSSLPIQNQAGNMANNRPLDATNKMVSATRVGISTQVVSQSHSLAVKDPASSSAVKKCQKSTEPSGNSSRKRIIDGPPEVLVERRQRRMLKNRESAARSRARKQAYTVELEAGLNRLRQENEKLKEILAEDERKRKEEEAFDNGSEKNREDEGYKEDSECCVVNDESVNHRGMRHVVSVYMMLADMASESPDDEDMDDSRKPNGSKAIGDYEGADRKNNRKIRSEKKMRGSPY 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1088 379 MobiDBLite consensus disorder prediction 279 303 - -
Bisa12g1088 379 SMART brlzneu 226 293 IPR004827 GO:0003700|GO:0006355
Bisa12g1088 379 MobiDBLite consensus disorder prediction 18 67 - -
Bisa12g1088 379 MobiDBLite consensus disorder prediction 340 379 - -
Bisa12g1088 379 MobiDBLite consensus disorder prediction 187 226 - -
Bisa12g1088 379 MobiDBLite consensus disorder prediction 133 164 - -
Bisa12g1088 379 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 228 280 IPR004827 GO:0003700|GO:0006355
Bisa12g1088 379 Pfam bZIP transcription factor 230 276 IPR004827 GO:0003700|GO:0006355
Bisa12g1088 379 MobiDBLite consensus disorder prediction 187 215 - -
Bisa12g1088 379 MobiDBLite consensus disorder prediction 23 44 - -
Bisa12g1088 379 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 233 248 IPR004827 GO:0003700|GO:0006355
Bisa12g1088 379 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 2 282 IPR043452 GO:0003700|GO:0045893
Bisa12g1088 379 Gene3D - 228 282 - -
Bisa12g1088 379 SUPERFAMILY Leucine zipper domain 230 275 IPR046347 GO:0003700|GO:0006355
Bisa12g1088 379 CDD bZIP_plant_BZIP46 230 271 - -
Bisa12g1088 379 MobiDBLite consensus disorder prediction 48 67 - -
Bisa12g1088 379 MobiDBLite consensus disorder prediction 332 379 - -
Bisa12g1088 379 Coils Coil 253 283 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1088 Bisa-ChrBisa12 17612618 17620140 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1088 2 284 bZIP Transcription Factor Family AT3G44460 41.156 7.08e-47 161
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bisa12g1088 bZIP_1 1.4e-09 CL0018
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1088 12 17612618 17620140 Bisa12g1088 12 17612618 17620140 ECH