Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1086 ATGAGGCTTTGCATGGCGAGTGAGTCAGGACCTTCAACTTCAACTCACCATCTTTCCTATGGAGCTCTTCATGGGATTAATTCTCCTGCATCATCCAGCTTAATGAATCCTGGGCCTGCTTTTGATTTTGGAGGGTTGGAGGAGGCAATTGTTATGCCAGGAGTGAAGACCAGAAGTGATGAAGCAAAAGCATGTGTGTATTGTTTTTCTATGCTTTATTCACAGGGAGGTTCAAGGTCAGGAGGGGAGAGCAGTGATTCAGGATCAGCTTTGAACACTATTTCAAGCAAAACAGAAGCACAGTATGAACCAGAATCTGAATCTCCAATGAGTAAAAAGGCATCGCCTTCTTCAGATTATCAGGCTTTTGATGGAAGCAATGCCTCAGGATGCCAAACACAGACTCAGAACCAAGCAGCTGCCAAATTTTCTCATGGAAAGAAATGGCTTAACGGCCATCTCCATTCACAAATGCTTCCCACTAATTCTGTGAGCACTCTAATCATTCATCTGTCGTCTCTTCTTGATTCAAACTCAAAGTATAGAACTGCTTATTATCTCTCTATGAGGAAGGGGGTTGGTTCTGCATCAGAGAAGCAACTTGATCCAAAGGCTTATGTGCAGCAGCTAGAGTCAAGCAGATTGAAGCTTTCCCAGCTTGAACAAGAACTTCAAAGAGCTCGTTCTCAGGGACAATTGGTGGGCTTTGGTGGGGCTGGTGGTGGCAATATAAGCTCTGGAGCTGCAATGTTCGACATGGAATATGGAAGATGGTTGGAAGAAGACGATCGGCAGGTGGGGGAGCTGCGGCTGAGGGTGGAGGGGGCGTTGGGGGAGGGGGAGCTGAGAGGGATGGTGGAGGCGTATCTGTCGCATTACGACGAGATGTTCGAGCTCAAGGGAGCAGCAGCCAAATCTGATGTGTTCCATCTCATCAATGGAATGTGGGCTTCCCCAGCTGAGCGCTGCTTCCTCTGGATTGCTGGTTTCAGACCCTCTGACCTCATTGCGATGGTGATACAGCAATTAGAGCCACTAGCAGAGCAGCAAATAATGGCCATCTATGCCCTTCGACACTCTTCGCAGCAAGCAGAGGATGCTCTCTCTCAAGGCCTTGACCAGCTCCAGCACTCTCTCGTCGACACCATCGCCGGCGGCCTTGTCGTCGACGGCATCCAACAGATGGTCCTCGCCATGACCAAGCTCTCCAACCTCGAAGGCTTTGTTCGCCAGGCTGATAATTTGAGACAGCAGACACTGCATCAGTTGTGTCGAATACTAACAGTTCGACAAGCAGCACGATGTTTCGTTGTGATCGGAGAGTACTATGGTCGTCTTCGAGCTCTTAGTTCTCTTTGGGCATCACGACCACGAGAGTGA 1380 0.4899 MRLCMASESGPSTSTHHLSYGALHGINSPASSSLMNPGPAFDFGGLEEAIVMPGVKTRSDEAKACVYCFSMLYSQGGSRSGGESSDSGSALNTISSKTEAQYEPESESPMSKKASPSSDYQAFDGSNASGCQTQTQNQAAAKFSHGKKWLNGHLHSQMLPTNSVSTLIIHLSSLLDSNSKYRTAYYLSMRKGVGSASEKQLDPKAYVQQLESSRLKLSQLEQELQRARSQGQLVGFGGAGGGNISSGAAMFDMEYGRWLEEDDRQVGELRLRVEGALGEGELRGMVEAYLSHYDEMFELKGAAAKSDVFHLINGMWASPAERCFLWIAGFRPSDLIAMVIQQLEPLAEQQIMAIYALRHSSQQAEDALSQGLDQLQHSLVDTIAGGLVVDGIQQMVLAMTKLSNLEGFVRQADNLRQQTLHQLCRILTVRQAARCFVVIGEYYGRLRALSSLWASRPRE 459
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1086 459 ProSiteProfiles DOG1 domain profile. 248 456 IPR025422 GO:0006351|GO:0043565
Bisa12g1086 459 PANTHER TRANSCRIPTION FACTOR TGA9 195 459 - -
Bisa12g1086 459 Pfam Seed dormancy control 266 340 IPR025422 GO:0006351|GO:0043565
Bisa12g1086 459 MobiDBLite consensus disorder prediction 78 137 - -
Bisa12g1086 459 Coils Coil 207 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1086 Bisa-ChrBisa12 17568615 17575967 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1086 195 459 bZIP Transcription Factor Family AT1G08320 68.302 4.33e-135 391
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1086 12 17568615 17575967 Bisa02g3535 02 87066984 87073184 CCT
Bisa12g1086 12 17568615 17575967 Bisa12g1086 12 17568615 17575967 ECH