Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1083 ATGGGGGATGAGAAGGGGGATGTGAGTGAAGGAGGAGCATTTGATACAGGAGATGAAGCGATGGGCGCAGGCAGAGGAGGTGGTGGACAGAGGGTGGTCGAAGAAACTCGGAGCAAGAAGGGCAGAAGGAAGAAGGATGGTGACAGAGTTGGAGGTGATTCTTCTTCTAGTTTATTAAGCATTGAGCGAGATGAGTTATTAGCAGATGGGGAGAATGAGAATAGGGGTGTTATATGAAAAATAACATTGGAACTTGGAAGAGCTTATAGTTCATATGACACTGGCTTCAGTCCTGAGTATGATGTACTTGGTTCATCAAGCCATAAAACACTAGTGTCCCTCGAGCTTAAGATTCCAGAGGATGGATCCCGCGTTTTTGGCCAAAGAATGAAAAGTTCAAAGAGGGTGGCAAAGAACTCCAGAGAACAGAAATCATCAGGTGGGATGTACCAGAATCACGCAAAGAACATTCACTCTTCTTCTTCTTCCAGAATGCCAATCCCGTCTGAGAGGCATATGTTTCTTCAAACAGGAAATGGGTCTGGTGATTCTGGACTTGTACTCTCAACTGATGCTAAGCCGAGATTGAAATGGACTCCAGATCTTCATGCCAGGTTTATAGAAGCAGTCAATCAGTTAGGCGGGGCTGACAAGGCAACTCCAAAAACAGTAATGAAACTCATGGGGATTCCGGGGCTCACTTTGTATCATCTTAAGAGCCACCTTCAGAAGTACAGACTGAGCAAGAATCTGCATGGGCAAAGTAACAGTGCGACACACAAAATCAGTGCAGTGAGCGGGGAAAGAATTTCTGAATCAAATGGAGCTCATAGTCATATGAACAATCTAAGCCTTGGGCCGCAGGCTAACAAAGATCTACATATAAGCGAGGCGTTGGAGATGCAGATTGAGGTGCAGAGAAGGCTAAATGAACAACTTGAGGTACAGAGACACTTGCAGCTACGCATAGAGGCCCAAGGGAAATACCTACAGGCTGTGCTTGAAAAAGCTCAGGAGACGCTTGGTAGACAGAATTTGGGAGTAGTAGGAATTGAAGCGGCTAAAGTTCAACTCTCGGAGCTGGTGTCCAAAGTATCATCTCAGTGTCTGAATTCTGCTTTTTCGGAGCTGAAGGAATTACCTGGATTTTGCCCACAGAACCAACCAACTGACTGCTCAATGGACAGTTCCCTCACATCCTGCGAGGGATCTCAAAGGGAGCAAGAGTTGCAAAATGGAGGGATGTGCTTAATAAGACCCTTCAATGGCCACACCTTCATGGAACCAAAGGAAACTCTTGAAGGGAAAAAGAACAATCTTCTTAATCCTTTGGGCAAGGATATTGCAGACAGAAGTACAAGCAACTTAACCATGAGCATTGGCGTGGAAGGAGAAACAAAGAATGGAAGCAGCATTTATCCTGAGAGAATAATGGTGGGGAGAGAGTCAAATGGTGAGTTCCAGCACCGAAACACCAATAGAACAGAAGCAATGAAGGCAGCGGATGAAACAGTTTCTCGAGATTATAGATTGCCATACTTTGCAACACCAAGACTAGACCTCAACACCCATCAAGAAAACGATGGTGCAACGAGTTGTAAACCACTGGACTTGAATGGATTTAGTTGGAACTGA 1635 0.452 MGDEKGDVSEGGAFDTGDEAMGAGRGGGGQRVVEETRSKKGRRKKDGDRVGGDSSSSLLSIERDELLADGENENRGVIXKITLELGRAYSSYDTGFSPEYDVLGSSSHKTLVSLELKIPEDGSRVFGQRMKSSKRVAKNSREQKSSGGMYQNHAKNIHSSSSSRMPIPSERHMFLQTGNGSGDSGLVLSTDAKPRLKWTPDLHARFIEAVNQLGGADKATPKTVMKLMGIPGLTLYHLKSHLQKYRLSKNLHGQSNSATHKISAVSGERISESNGAHSHMNNLSLGPQANKDLHISEALEMQIEVQRRLNEQLEVQRHLQLRIEAQGKYLQAVLEKAQETLGRQNLGVVGIEAAKVQLSELVSKVSSQCLNSAFSELKELPGFCPQNQPTDCSMDSSLTSCEGSQREQELQNGGMCLIRPFNGHTFMEPKETLEGKKNNLLNPLGKDIADRSTSNLTMSIGVEGETKNGSSIYPERIMVGRESNGEFQHRNTNRTEAMKAADETVSRDYRLPYFATPRLDLNTHQENDGATSCKPLDLNGFSWN 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1083 544 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 190 250 IPR017930 -
Bisa12g1083 544 MobiDBLite consensus disorder prediction 131 166 - -
Bisa12g1083 544 Pfam MYB-CC type transfactor, LHEQLE motif 294 340 IPR025756 -
Bisa12g1083 544 Gene3D - 192 250 - -
Bisa12g1083 544 MobiDBLite consensus disorder prediction 142 166 - -
Bisa12g1083 544 SUPERFAMILY Homeodomain-like 192 248 IPR009057 -
Bisa12g1083 544 Coils Coil 296 316 - -
Bisa12g1083 544 MobiDBLite consensus disorder prediction 522 544 - -
Bisa12g1083 544 FunFam Myb family transcription factor 192 250 - -
Bisa12g1083 544 MobiDBLite consensus disorder prediction 1 57 - -
Bisa12g1083 544 MobiDBLite consensus disorder prediction 32 51 - -
Bisa12g1083 544 Pfam Myb-like DNA-binding domain 195 246 IPR001005 -
Bisa12g1083 544 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 161 430 IPR044848 GO:0003700
Bisa12g1083 544 NCBIfam myb-like DNA-binding domain, SHAQKYF class 193 248 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1083 Bisa-ChrBisa12 17533051 17543759 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1083 225 544 G2-like Transcription Factor Family AT3G04030 50.301 6.39e-88 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bisa12g1083 Myb_DNA-binding 5.3e-08 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1083 12 17533051 17543759 Bisa02g3533 02 87043044 87045404 CCT