Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1081 ATGCTTCATCAGCCGCTTGAAACCCTAGCTGCACCTTCGCCTGCGTCTGTCTCCGGAGTGAGATCTGTAGCTGCGGCGTTGAGAAGGCGAAGTCTTAAAGATGAGGTTGTATTACTAATGCTTATCTTCCATTTTAAGCTTCAGAGTGATGCTCTAAGAGAAGCTATCTCAGGAATCATGAATGATTCCAAGGAGAAGAAGCGCAACTTTGTAGAGACCATTGAACTCCAGATTGGACTGAAAAATTATGATCCTCAAAAGGATAAGCGTTTCAGCGGTTCTGTCAAGTTGCCACACATCCCTCGCCCGAAGATGAAAATATGCATGCTTGGAGACGCTCAGCATGTTGAAGAGGCTGAGAAGATTGGGTTGGACTATATGGATGTGGAAGGGTTGAAGAAGCTAAACAAGAATAAGAAATTGGTTAAAAAACTAGCCAAAAAATACCATGCCTTTTTAGCATCTGAAGCAGTCATAAAGCAGATTCCCCGTCTCTTGGGTCCTGGTCTTAACAAGGCAGGGAAATTCCCCACACTTGTTACTCACCAAGAATCCCTCGAGTCAAAGGTTAATGAAACCAAGGCAATGGTAAAATTTCAGCTAAAGAAGGTGCTCTGCATGGGAGTTGCTGTCGGGAATGTTAGTATGGAGGAAAAGCAAATCTTCCAAAATGTACAAATGAGCGTCAACTTCCTTGTGTCCTTGTTGAAAAAGAATTGGCAGAATGTTCGTTGCTTGTATCTGAAGAGTACCATGGGGAAATCATACCGTGTCTTTTGA 780 0.4321 MLHQPLETLAAPSPASVSGVRSVAAALRRRSLKDEVVLLMLIFHFKLQSDALREAISGIMNDSKEKKRNFVETIELQIGLKNYDPQKDKRFSGSVKLPHIPRPKMKICMLGDAQHVEEAEKIGLDYMDVEGLKKLNKNKKLVKKLAKKYHAFLASEAVIKQIPRLLGPGLNKAGKFPTLVTHQESLESKVNETKAMVKFQLKKVLCMGVAVGNVSMEEKQIFQNVQMSVNFLVSLLKKNWQNVRCLYLKSTMGKSYRVF 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1081 259 CDD Ribosomal_L1 52 258 IPR028364 -
Bisa12g1081 259 ProSitePatterns Ribosomal protein L1 signature. 159 178 IPR023673 -
Bisa12g1081 259 PANTHER RIBOSOMAL PROTEIN L7AE FAMILY MEMBER 54 253 - -
Bisa12g1081 259 FunFam Ribosomal protein 108 197 - -
Bisa12g1081 259 Gene3D - 64 254 - -
Bisa12g1081 259 Gene3D - 108 197 IPR016095 -
Bisa12g1081 259 Pfam Ribosomal protein L1p/L10e family 64 253 IPR028364 -
Bisa12g1081 259 SUPERFAMILY Ribosomal protein L1 65 259 IPR023674 -
Bisa12g1081 259 FunFam Ribosomal protein L10a 44 162 - -
Bisa12g1081 259 FunFam Ribosomal protein 180 257 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1081 Bisa-ChrBisa12 17518074 17520658 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1081 46 259 Cytoplasmic Ribosomal Protein Gene Family AT1G08360 90.187 8.53e-129 362