Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1078 ATGGCAGAGACGGAGAAAGTGGTGACGGAGAAGGTGGTGCCGGAGACGGAGGAGCTTCCGAGGGCTATCGTGCGCCGGGTGGTGAAGGATGAACTCTCGCGCTGCTCCACTGACGGAGACATTTCTGTTCACAAAGATGCCCTTCTCGCTTTCTCGGAAAGCGCGCGGATCTTTATTCACTACCTTTCCGCGACGGCAAATGACATATGCAAGGAGTCCAAGAGGCAGATAATAAATGCTGATGATGTATTTAAAGCTCTTGAAGATACTGAGTATTCGGAGTTTGTCCGGCCTTTAAAAGCTTCTCTCGAAGAGTTCAGGAAGAAGAATGCTGGAAAGAAAGCGGCAGCTTCAAAGGGAAAAGACATGAAAAAGAAAAGAAAGTTGGAAGGGGACTCCTCTGATAAAGGCGAGGGTGGTGACGACCAATGA 432 0.4931 MAETEKVVTEKVVPETEELPRAIVRRVVKDELSRCSTDGDISVHKDALLAFSESARIFIHYLSATANDICKESKRQIINADDVFKALEDTEYSEFVRPLKASLEEFRKKNAGKKAAASKGKDMKKKRKLEGDSSDKGEGGDDQ 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1078 143 MobiDBLite consensus disorder prediction 110 143 - -
Bisa12g1078 143 FunFam DNA polymerase epsilon subunit 3 11 143 - -
Bisa12g1078 143 SUPERFAMILY Histone-fold 19 125 IPR009072 GO:0046982
Bisa12g1078 143 PANTHER DNA POLYMERASE EPSILON SUBUNIT 3 12 139 - -
Bisa12g1078 143 MobiDBLite consensus disorder prediction 110 136 - -
Bisa12g1078 143 Gene3D Histone, subunit A 10 142 IPR009072 GO:0046982
Bisa12g1078 143 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 18 87 IPR003958 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1078 19 138 CCAAT-HAP3 Transcription Factor Family AT2G37060 32.500 9.60e-12 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa12g1078 CBFD_NFYB_HMF 8.9e-09 CL0012