Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1066 ATGGAGGATCTCCCACCTGGGTTTCGGTTCTACCCAACAGAAGAGGAGCTCGTTGCTTTCTACCTCCACAACAAGCTCCAAGGCCTAACTCAAACTCACCCCATCAACAGAGTCATCCCTGTCATCACTCTTTACGACTTCGAGCCATGGCACCTTCCAAAACTTGCGGGAGAGATGTGCGGAGGAGACAGAGAGCAGTGGTTCTTCTTCTCGCCGAGGCAAGAGAAAGAGGCGAACGGAGGCAGACCGAGGCGAACAACGACGTGTGGGTACTGGAAGGCGACAGGGTCGCCGGGATACGTTTACTCGTCGGATAACAGAGTGATAGGGGTAAAGAAGACGATGGTGTTTTACAGAGGGAAAGCTCCGTGTGGAAGAAAAACCAAGTGGAAGATGAACGAATACAAAGTCATTCAACTCTTTCACTCTCACCAATCCACCATAACCACTCCTCAGTTGAGGCACGAACTCAGCTTGTGCCGAGTTTATGTGATGTCGGGAAGCTCTCGAGCATTTGATCGTCGCCCTTTGACCTAA 537 0.5121 MEDLPPGFRFYPTEEELVAFYLHNKLQGLTQTHPINRVIPVITLYDFEPWHLPKLAGEMCGGDREQWFFFSPRQEKEANGGRPRRTTTCGYWKATGSPGYVYSSDNRVIGVKKTMVFYRGKAPCGRKTKWKMNEYKVIQLFHSHQSTITTPQLRHELSLCRVYVMSGSSRAFDRRPLT 178
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1066 178 SUPERFAMILY NAC domain 3 164 IPR036093 GO:0003677|GO:0006355
Bisa12g1066 178 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 3 164 - -
Bisa12g1066 178 Pfam No apical meristem (NAM) protein 5 136 IPR003441 GO:0003677|GO:0006355
Bisa12g1066 178 Gene3D NAC domain 13 168 IPR036093 GO:0003677|GO:0006355
Bisa12g1066 178 ProSiteProfiles NAC domain profile. 4 165 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1066 Bisa-ChrBisa12 17267771 17270669 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1066 2 176 NAC Transcription Factor Family AT5G22380 63.429 4.97e-79 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa12g1066 NAM 1.2e-31 No_clan