Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1050 ATGGGGTCTCGAATGGATCAATATGAGATCATGGAGCAGATCGGTCGTGGAGCTTTTGGAGCTGCTATTCTTGTCCATCACAAAGCTGAGAAGAAGAAATACGTGTTGAAAAAAATAAGGCTTGCGCGGCAGACTGAACGTTGCAGAAGGTCTGCTCATCAAGAGGGTTGCTACGTTTGCATTGTCACTGGATACTGTGAAGGTGGAGACATGGCTGAATTGATGAAAAAATCAAATGGGGTTTACTTTCCCGAGGAGAAACTCCGCAAGTGGTTCACCCAATTACTGTTAGCTGTAGAATACCTGCACTCAAATTTTGTTCTACACCGTGACCTAAAGGATCAGGATGTTCGGTTGGGCGATTTTGGACTTGCCAAGACACTAAAAGCAGATGATTTGGCTTCTTCGGTGGTAGGAACTCCCAACTACATGTGCCCTGAATTGCTTGCAGATATTCCTTATGGATTTAAATCTGATATTTGGTCATTAGGGTGCTGTGTATATGAGATGGCTGCACATCGTCCTGCTTTTAAAGCTTTTAGAAACGTCACCATGGTGCTTTTCTGGATGTTTGACAACATTGTGGTAAATCTTGTTCCAGGATATGGCAGGATTGATAAGCAAAGTAAATCGTTCATCTATTGGACCTTTGCCGCCCTGTTATTCCCCGTCCTTGGTGATGACAGCAAGATATTCTTGCTTGAATGTGTGCATGTGAAAACACTGATCAAGGGCATGCTGAGAAAAAGCCCTGAGCATCGTCCTACAGCATCTGATATCTTAAAGCATCCTTATTTACAACCTTATGTTGATCAATTGCGTGAAACTTTTTGTCCTCCAACATCCTGTTCTCCTGAAAAACCAATATCTGTTGCCCACAATGATCCTCGAAGAAATATAGCAGAAAGTCAAAACAGTAGTACTTCAAGTTATGACAAAGATAGTTTGGTGTCAAATGAGAGAAACATTTCCACAGCAGTGCCAAAGTGCAGTAACAAAGCCACTGAGACAGATCTGGCATCTAATGATAACGAAGATGGCTCAAGCCATCTGCATTATGAAGAAGAAAATGGCTTCAGCACTGGCAATGCCAAGACAGATGAACTAGATGCAATGAAGACATTACATAATCAACAGCAATCAAATATTGAATCGAAGCAGCGGAAAACAATTAAAACTATAATAATGTCATCAAAGGAGGGAAAAATTAGAGAAAATAGTTCTCCAGTGAGAGGCAATCACATAAAGGCCAGTAGTGTAACACAGAAAACAAAGACAGAGACACTGCCCAAATTGCCCAAATCTAATCTTGTTGCTCCTGGTTTCAAGCCTAGTTTTGTGTCACCAACTGTTTCGCCTGCAAAGGTAATCCCTGATCCTGTAAAACGGATGCATGGACCACATCTTTTAAAACATCAGTTACTGATGGCAGACTCTTCACCAAAAACTAAACCCAGACATGATTGGACTCCCCCATCTGGTCCTATTAAACAAGTTGAAGGAGGTGGTGTTCCTGCCAAGCCAAGGCAAAGGACCCCCCCAAACTTGCTTAGACGACCTCCATTTCCAGGAAAAATGAGGCAGGTCGTGCTTAATGTTCCAAATTTAGTCACTGATCATGAGAATTTGGGTCCAAATAAAGTATCACTGGAGCCTGAAAAGAGTCCTTGTCAGTTGCCCAATGGTCATGTGCCACATGTTTCTAGAGAAATTACAAGAGAGCCTCAAAAGGTTTTCGAAAGGGGTTCAAAAGGGATGCAAACAGATGACAGCAATTCTGTCTCATCTTCAGTGTCAATGCAAGGATTTGAGCTTTCTGATGATGCAACAACTTTCATTGATTTGAGAGAACAGATACTTCCTGATCATGAGACTGTGGCCCACAATGAAAGAGTGGAATCTCATCCAGATAGCAGTTCACCTGCTACCATTTTGCCTAGTGAGATAGCTAAAAATATGTGTAGGGAAACCTCTGAGGATACCATACATCTTCAGAATACAATTACTAGTAATCAGAAAGTGAGCTCCAGTTTAAATCATGATCATCCACTTCTCAATTCTAAGGAAATTTTTATCTCTGAAGACGTTCTCCCCATAAATCAGACAGGTATATCTGCTGCCTCTGAAGTTGATAATAGACCTGCAAGTCCCTCTGTTAAGGCCACTGAAGAAATCAAACGTCTTCAGGATACTAACGAGGAAGTGAATTCAACTAAGTCCCTCACGCCTCCACACCCAAGTTCTGGAGAAAAGTTTGTCTGTGAAATTGTTCCTGTGAGCTACCCAAGTAATAGGCCTCATGTAGTCAGCAGTCCAGAACTTAAGTGTATGTCTGCTGGTGATGACAAATTCACTGTAAGGGAACGACTATCATTAGTGGCTGATACTGACCCTCCAGTTACCTCTTCCAAAATATCAACCCCGGAAGGTTTGCACGAAGAGAAAGAAACTGTTTTGAACAATCCAACAAGAGGAAGGCCAGCTGCTGGCCAACTTCCTCCAGCTTTTGATGATGTCATCCATGTTATACGACATAGCAGCTACCGAGTCAGTAATGAGCAACCGATTAACGAATCTGTGGAGATGGGAGCTCAAAACGTGGATGTTGGTAAAATTTTCAATGTAGTAAAGGATGAATTAGAGGTAAGGAATATAAACACTCCTTTAACCCTTGTGTCATCAAGTTGCTCTGAAGCTGTGAGCTTGAATTCAAGTAGTTCTGAACATTTAGAAATGAGAAACACGAGCACTCCTCCAATCTTACAATCTTCTAGTTGCTCTGATGCCTCGAGCTTGAAATCAAATGTTTCTGATCATTCTGGTGTTAGGGAACTAGATTTGAGGAATCCTGTTTCCCTAATTTCACAATCTGATTCTGCTGAGTTGACTAAATCTAATGCTTCGATGACTGACGAAGAAAAATCAGCAAAGGAAACTTTGGATGTTAAATCTTTCAAGCAGAGAGCAGAAGCACTTGAAGGGCTCTTGGAATTATCTGCGGATTTGCTGCAACAAAGTAGATTGGAAGAACTTGCAGTGGTTCTAAAGCCCTTTGGGAAAGATAAGGTGTCCCCAAGGGAGACGGCCATTTGGTTAGCCAAGAGTCTAAAAGGAATGATGATCGAGGACAGTGTGGAACGCTGTTCATGA 3150 0.419 MGSRMDQYEIMEQIGRGAFGAAILVHHKAEKKKYVLKKIRLARQTERCRRSAHQEGCYVCIVTGYCEGGDMAELMKKSNGVYFPEEKLRKWFTQLLLAVEYLHSNFVLHRDLKDQDVRLGDFGLAKTLKADDLASSVVGTPNYMCPELLADIPYGFKSDIWSLGCCVYEMAAHRPAFKAFRNVTMVLFWMFDNIVVNLVPGYGRIDKQSKSFIYWTFAALLFPVLGDDSKIFLLECVHVKTLIKGMLRKSPEHRPTASDILKHPYLQPYVDQLRETFCPPTSCSPEKPISVAHNDPRRNIAESQNSSTSSYDKDSLVSNERNISTAVPKCSNKATETDLASNDNEDGSSHLHYEEENGFSTGNAKTDELDAMKTLHNQQQSNIESKQRKTIKTIIMSSKEGKIRENSSPVRGNHIKASSVTQKTKTETLPKLPKSNLVAPGFKPSFVSPTVSPAKVIPDPVKRMHGPHLLKHQLLMADSSPKTKPRHDWTPPSGPIKQVEGGGVPAKPRQRTPPNLLRRPPFPGKMRQVVLNVPNLVTDHENLGPNKVSLEPEKSPCQLPNGHVPHVSREITREPQKVFERGSKGMQTDDSNSVSSSVSMQGFELSDDATTFIDLREQILPDHETVAHNERVESHPDSSSPATILPSEIAKNMCRETSEDTIHLQNTITSNQKVSSSLNHDHPLLNSKEIFISEDVLPINQTGISAASEVDNRPASPSVKATEEIKRLQDTNEEVNSTKSLTPPHPSSGEKFVCEIVPVSYPSNRPHVVSSPELKCMSAGDDKFTVRERLSLVADTDPPVTSSKISTPEGLHEEKETVLNNPTRGRPAAGQLPPAFDDVIHVIRHSSYRVSNEQPINESVEMGAQNVDVGKIFNVVKDELEVRNINTPLTLVSSSCSEAVSLNSSSSEHLEMRNTSTPPILQSSSCSDASSLKSNVSDHSGVRELDLRNPVSLISQSDSAELTKSNASMTDEEKSAKETLDVKSFKQRAEALEGLLELSADLLQQSRLEELAVVLKPFGKDKVSPRETAIWLAKSLKGMMIEDSVERCS 1049
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1050 1049 MobiDBLite consensus disorder prediction 904 941 - -
Bisa12g1050 1049 PANTHER SERINE/THREONINE-PROTEIN KINASE NEK 5 997 - -
Bisa12g1050 1049 Gene3D Transferase(Phosphotransferase) domain 1 68 346 - -
Bisa12g1050 1049 MobiDBLite consensus disorder prediction 402 428 - -
Bisa12g1050 1049 Coils Coil 718 738 - -
Bisa12g1050 1049 Gene3D Phosphorylase Kinase; domain 1 1 59 - -
Bisa12g1050 1049 MobiDBLite consensus disorder prediction 287 361 - -
Bisa12g1050 1049 ProSitePatterns Protein kinases ATP-binding region signature. 14 37 IPR017441 GO:0005524
Bisa12g1050 1049 MobiDBLite consensus disorder prediction 297 338 - -
Bisa12g1050 1049 MobiDBLite consensus disorder prediction 479 523 - -
Bisa12g1050 1049 MobiDBLite consensus disorder prediction 411 428 - -
Bisa12g1050 1049 MobiDBLite consensus disorder prediction 904 938 - -
Bisa12g1050 1049 MobiDBLite consensus disorder prediction 339 353 - -
Bisa12g1050 1049 ProSiteProfiles Protein kinase domain profile. 8 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1050 1049 SUPERFAMILY Protein kinase-like (PK-like) 4 311 IPR011009 -
Bisa12g1050 1049 Pfam Protein kinase domain 54 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1050 1049 Coils Coil 369 389 - -
Bisa12g1050 1049 MobiDBLite consensus disorder prediction 795 833 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1050 Bisa-ChrBisa12 17036062 17041241 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1050 14 266 MAP Kinase Kinase Kinase AT1G09000 27.645 1.05e-23 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK NEK Bisa12g1050 Pkinase 3.3e-39 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1050 12 17036062 17041241 Bisa02g3488 02 86450421 86457355 CCT
Bisa12g1050 12 17036062 17041241 Bisa12g1050 12 17036062 17041241 ECH