Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1045 ATGGAATGTAGCCGTCTGAGACCGAATCTCTGCATTATCCTCATTTGTTGTCTAATTACGGTGAGTGATGGTGCTACGGATCCAAATGATCTAAAAGTTCTGAACGATTTCAGAAAAGGGTTGGAGAATCCAGAGCTTCTCAAATGGCCAGACAATGGAGATGACCCATGTGGCAATCCCCCATGGCCTCATGTGTTCTGCTCTGGTGATAGAGTAACGCAGATTCAGGCTAAGTCTCTGGGTCTCAAAGGGTCATTGCCTCCAAATTTCAATCAGTTATCAGAGCTCAACAATCTAGGTCTTCAACACAACAAGCTCAGTGGAATGTTGCCCACTTTCAGAGGATTATCCAGATTAGAATTCGCTTTCTTGGACTACAATGAATTTGATGCAATACCCTCTGATTTCTTCAACGGACTTACCAGTCTAAGAGTCTTGTCTTTGGAAGAAACTCCATTAAATGCGAGTACTGGGTGGTCTTTTCCTCTTGATTTAGAAAAATCAGCACAACTAACAAATCTGTCTCTTGTTCACTGTAATTTGGTTGGACCATTGCCAGATTTTCTAGGCACATTGCCATCTCTCACGAATCTGAGACTTTCAGACAACAGACTCTCTGGTGGCATTCCAACTAGCTTTGCTCAGTCTTCGATGCAGGTTTTGTGGTTGAATAATCAAGATGATGGTGGAATGACAGGTCCTATTGATGTTATTGCTTCAATGACTTTCCTCACACAGATTTGGCTACATGGAAACCAATTCACTGGGACAATTCCAGAGAATATCGGGAATCTAACCTCCTTGGTGGAGCTCAACCTCAATAGTAATCAACTTGTTGGCTTGATTCCACAGAGCCTGGCCAATATGGAGCTTAAGGTATTGGTGTTAAACAATAACAAGCTAATGGGTCCTATACCAAAGTTCAAGGCCGGTAATGTTTCTTATGATTCCAATTTCTTTTGTCAAACTAAGCCTGGACTTGAATGTGCCCCCGAAGTTACTGCACTTTTGGATTTTCTGCGTAATCTGAATTTCCCATCAATTCTTACTTCTGAATGGTCTGGTAATGAACCATGTAGAGGGCCATGGTTGGGATTGAGCTGCAATCCCAAGTCAGAGGTATTTGTTATCAATTTACCAAGACATAGGCTCAATGGTACTCTTAGTCCTTCACTTGCTAAGTTAGATTCACTCCTTGAAATTAGGCTTGCAGGAAATAACATAACTGGCACAGTTCCTAGTAATTTTACTGAATTAAAATCTTTGAGGTTGCTGGATTTAGGTGATAACAATCTTGAGCCTCCATTGCCAAACTTTCGTGATGATGTGAAGGTTGTTATTGAGGGAAACTCTCTTCTTGCTAATCAAACTCCCTTGCCTTCTATAAGTCCACCACCTTCGAGTTCACAATCACCACCTTCCTATAAGCCACCTTCACCAAGTCATAATTCAAGCTCAAACCCATTTAAATCCCTATCAAATGATTCCAAAAGAATCAAAACAATAGCTTTAGTAGCTGGAGTTGCAATACTGGGAGTTGCTGCAGTTTTGGTTATTTTTCTATTCATATGTTGCTCGAAGAAGAGGAAGAAAGCCTCATTATCCGCTCCTACTTCCATTGTGGTTCACCCTAGAGATCAATTTGATCCAGAAAATGTTGTTAAAATTGCTGTTTCAAACAACACTGGGAGCTTATCAACAAAGACTGGGACAAGTTCCATGAGCAACCTTAGTGGTGAAACTGATAATACTCATGTAATTGAGACTGGCAACCTTGTTATCTCTGTTCAAGTTCTACGCAAGGTTACCAAGAATTTTTCTTCAGAAAATGAGCTGGGCCATGGTGGGTTTGGAACTGTTTATAAGGGTGAACTCGAAGATGGAACAAAAATAGCAGTGAAGAGAATGGAGGGTGGTGCTATTAGCAGCAAAGCACTGGATGAATTTGAGGCTGAAATCGCTGTACTTTCCAAGGTTCGTCACCGGCATTTGGTGTCCCTGTTAGGATATTCCATTGAAGGCAATGAAAGACTGTTGGTTTACGAATATATGCCTCTGGGTGCTCTAAGCAGGCATCTTTTTCATTGGAAAAAGCTGAATTTGGAGCCTTTGTCTTGGTCAAAGAGGCTGGCCATAGCACTAGATGTTGCTAGAGGAATGGAATATTTACATGGTCTTGCTCGTCAAACCTTCATCCACCGAGACCTCAAGTCTTCTAATATTTTACTGGGTCACGATTTTCGGGCGAAAGTTTCGGACTTTGGTCTGGTGAAACTTGCCCCGGATGGTGAGAAGTCTGTTGCAACTAAGCTTGCTGGGACATTTGGATACCTTGCCCCTGAATATGCAGTGATGGGGAAAATCACCACTAAAGTTGATGTGTTCAGCTTCGGCGTGGTGTTGATGGAGCTTCTAACTGGACTAGTGGCGCTTGATGAGAGCCGGCCAGAGGAAACTCGGTACTTGGCTGACTGGTTTTGGCGCATTAAATCAAGCAAAGAGAAGCTTATGGCTGCCATAGACCCAGCTATTGAGGCTAATGAAGAGACTTTTGAGAGTATTTGCATTATAGCAGACCTCGCTGGGCATTGCACTGCGCGGGAACCCCACCATCGACCAGATATGTCTCATGCGGTAAATGTACTGGCAGCATTAGTAGAGAAATGGAGACCAGTCGATGATGAATTTGATTCTTTCACTGGCATTGACTTGAGCCAACCACTTCCTCAGATGTTGAGGATTTGGAAGGAAGCAGAAAGTAGAGACGAAAGCTATGCAAGTCAAGATAGCAAAGGCAGTATACCAGCTAGGCCTACTGGGTTTGCAGACTCATTTACTTCTGCAGATGCTCGATGA 2856 0.4275 MECSRLRPNLCIILICCLITVSDGATDPNDLKVLNDFRKGLENPELLKWPDNGDDPCGNPPWPHVFCSGDRVTQIQAKSLGLKGSLPPNFNQLSELNNLGLQHNKLSGMLPTFRGLSRLEFAFLDYNEFDAIPSDFFNGLTSLRVLSLEETPLNASTGWSFPLDLEKSAQLTNLSLVHCNLVGPLPDFLGTLPSLTNLRLSDNRLSGGIPTSFAQSSMQVLWLNNQDDGGMTGPIDVIASMTFLTQIWLHGNQFTGTIPENIGNLTSLVELNLNSNQLVGLIPQSLANMELKVLVLNNNKLMGPIPKFKAGNVSYDSNFFCQTKPGLECAPEVTALLDFLRNLNFPSILTSEWSGNEPCRGPWLGLSCNPKSEVFVINLPRHRLNGTLSPSLAKLDSLLEIRLAGNNITGTVPSNFTELKSLRLLDLGDNNLEPPLPNFRDDVKVVIEGNSLLANQTPLPSISPPPSSSQSPPSYKPPSPSHNSSSNPFKSLSNDSKRIKTIALVAGVAILGVAAVLVIFLFICCSKKRKKASLSAPTSIVVHPRDQFDPENVVKIAVSNNTGSLSTKTGTSSMSNLSGETDNTHVIETGNLVISVQVLRKVTKNFSSENELGHGGFGTVYKGELEDGTKIAVKRMEGGAISSKALDEFEAEIAVLSKVRHRHLVSLLGYSIEGNERLLVYEYMPLGALSRHLFHWKKLNLEPLSWSKRLAIALDVARGMEYLHGLARQTFIHRDLKSSNILLGHDFRAKVSDFGLVKLAPDGEKSVATKLAGTFGYLAPEYAVMGKITTKVDVFSFGVVLMELLTGLVALDESRPEETRYLADWFWRIKSSKEKLMAAIDPAIEANEETFESICIIADLAGHCTAREPHHRPDMSHAVNVLAALVEKWRPVDDEFDSFTGIDLSQPLPQMLRIWKEAESRDESYASQDSKGSIPARPTGFADSFTSADAR 951
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1045 951 SUPERFAMILY Protein kinase-like (PK-like) 586 882 IPR011009 -
Bisa12g1045 951 FunFam receptor protein kinase TMK1 568 683 - -
Bisa12g1045 951 FunFam Leucine-rich repeat receptor-like kinase 331 456 - -
Bisa12g1045 951 Gene3D Phosphorylase Kinase; domain 1 567 683 - -
Bisa12g1045 951 FunFam Receptor-like kinase TMK4 28 326 - -
Bisa12g1045 951 Pfam Protein tyrosine and serine/threonine kinase 609 880 IPR001245 GO:0004672|GO:0006468
Bisa12g1045 951 Pfam Leucine rich repeat N-terminal domain 28 68 IPR013210 -
Bisa12g1045 951 Pfam Leucine rich repeat N-terminal domain 331 369 IPR013210 -
Bisa12g1045 951 SUPERFAMILY L domain-like 331 438 - -
Bisa12g1045 951 ProSitePatterns Protein kinases ATP-binding region signature. 612 634 IPR017441 GO:0005524
Bisa12g1045 951 FunFam receptor protein kinase TMK1 684 901 - -
Bisa12g1045 951 SMART LRR_typ_2 93 115 IPR003591 -
Bisa12g1045 951 SMART LRR_typ_2 192 215 IPR003591 -
Bisa12g1045 951 SMART LRR_typ_2 265 288 IPR003591 -
Bisa12g1045 951 SMART LRR_typ_2 140 163 IPR003591 -
Bisa12g1045 951 SMART LRR_typ_2 116 139 IPR003591 -
Bisa12g1045 951 SMART LRR_typ_2 419 441 IPR003591 -
Bisa12g1045 951 SUPERFAMILY L domain-like 26 307 - -
Bisa12g1045 951 PANTHER OSJNBA0070M12.3 PROTEIN 12 951 - -
Bisa12g1045 951 Gene3D Ribonuclease Inhibitor 331 457 IPR032675 -
Bisa12g1045 951 MobiDBLite consensus disorder prediction 459 479 - -
Bisa12g1045 951 ProSitePatterns Serine/Threonine protein kinases active-site signature. 731 743 IPR008271 GO:0004672|GO:0006468
Bisa12g1045 951 MobiDBLite consensus disorder prediction 456 492 - -
Bisa12g1045 951 SMART serkin_6 606 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1045 951 Gene3D Ribonuclease Inhibitor 28 326 IPR032675 -
Bisa12g1045 951 MobiDBLite consensus disorder prediction 923 951 - -
Bisa12g1045 951 CDD STKc_IRAK 612 882 - -
Bisa12g1045 951 Gene3D Transferase(Phosphotransferase) domain 1 684 898 - -
Bisa12g1045 951 ProSiteProfiles Protein kinase domain profile. 606 885 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1045 Bisa-ChrBisa12 16990835 16993775 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1045 60 923 Receptor kinase-like Gene Family AT1G55610 29.666 2.14e-83 290
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-IX Bisa12g1045 PK_Tyr_Ser-Thr 5.1e-46 CL0016