Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1037 ATGGCGACGTACTTTCAAGGGAGCGATTTAGAAATTCAAGCAGCTCCTTCTCCTGACGGCTTTCACAAGCTTTACCTTCTTAACCCTGCCTCCGCCTCCGCCGCTACCTACGTACCCTACTCCGACGCCGGCGCTTCCCACACCCCAAACTTTCTCCTTCTCAACCGCAACTCTCACAATCTCGCGAGCCTCCCCCACGCGCCGCCTCCCTCCTCCTCCAATCACGGCCTCGTCGCTCTCGGATCCGACGACCCCACCCGACCCGCCTTCCTCGGACACGAAAACTCTGGCTTCCACGGGTTCACTGCGGCGGCCGAACCTCCACCTCCACGTGTCCACTACAACTTCTGGGGTTCCATGATTGATCATCAAGCCCCGTCGGCAGCGGCTTCCACCAGCTCCGGTGGGGCTGCTTCTGCAGACCCCGTGTCACCCCACATGGGTTTCCGGCGACCCAGTCAGCAGGGTCTGTCGCTCAGCCTCTCCTCACAGCAGCAACAAACAGCTTTCAATAGGTCACTCTCCGGCGAGTTTGACCCTCCCGTACAACCTCGAGCCGGTAGTGATGTGAGGATTCTGGGTAATCATATACCTTCCTCGACGACGTCGTTTTCGAATGGAGTTTCGAATATGCAGAGTTTTGTGTTGGGGTCTAAGTACTTGAGAGCTGCGCAAGAGGTCTTAGACGAAGTGGTGAATGTCGGTAAGGGAATCCATAAAGACGACTCCACAGAGAGGAATTATGATAAAGACAAGGCAAAGCTGAATAGAGAATCCACATCTGGTGGTATTGCTGAAGGAGGAGGAGGAGAACTCAGTACAGCGCAAAGACAAGAGCTTCAGATGAAGAAGTCCAAGCTCGTTAGCATGCTCGATGAGGTGGAACAAAGGTACAGACAGTATCAGCACCAGATGCAGATAGTGATATCATCATTTGGGGAAGCAGCGGGATACGGTGCAGCGAGAACATACACAGCCCTTGCACTGAAGACGATATCCAAGCAATTTCGAAGTCTGAAGGACGCAATAGCGTGGCAAGTGAGAGCGACGAGAAAGAGCTTAGGGGAGGAGGATTGCATGGGAGGGAAGGTAGAAGGGTCGAGGCTGAGGTATGTGGACCATCATCTGCGCCAACAAAGGGCATTGCAGCACCTGGGAATGAATATGATGCAGCACAATGCCTGGAGACCCCAGAGAGGCTTGCCTGAACGAGCTGTCTCCATTCTTCGTGCTTGGCTCTTCGAGCACTTTCTTCACCCATATCCCAAGGACTCCGATAAAGTTATGCTTGCAAAACAAACTGGACTTACTCGTGGCCAGGTGTCAAACTGGTTCATAAACGCAAGAGTTCGGCTATGGAAGCCAATGGTAGAAGAAATGTACACGGAGGAAATGAAGGAGCAAGAGGGCATCAGTGGTTCCCAGGAAAATAATAATAATACTAATAATAATAATAATGATAGAAACAGCAGCAGAACAACAAAAGAAGCTGGGAAGGAGGTGGTGGGGTCGTCACCCACTAAGGACTCATCATCACAGCTGCAAGATCATCATCATCATCTTCAGATCAATTCCTTCCAATCTAACAATAACAACAACAATCCACCAGATCAAAGCTTCACCAACCACAAACATCCCCATCTCACATCTCAATTCCTTCAATGTACATCGTGGACATGGAACTGA 1686 0.5113 MATYFQGSDLEIQAAPSPDGFHKLYLLNPASASAATYVPYSDAGASHTPNFLLLNRNSHNLASLPHAPPPSSSNHGLVALGSDDPTRPAFLGHENSGFHGFTAAAEPPPPRVHYNFWGSMIDHQAPSAAASTSSGGAASADPVSPHMGFRRPSQQGLSLSLSSQQQQTAFNRSLSGEFDPPVQPRAGSDVRILGNHIPSSTTSFSNGVSNMQSFVLGSKYLRAAQEVLDEVVNVGKGIHKDDSTERNYDKDKAKLNRESTSGGIAEGGGGELSTAQRQELQMKKSKLVSMLDEVEQRYRQYQHQMQIVISSFGEAAGYGAARTYTALALKTISKQFRSLKDAIAWQVRATRKSLGEEDCMGGKVEGSRLRYVDHHLRQQRALQHLGMNMMQHNAWRPQRGLPERAVSILRAWLFEHFLHPYPKDSDKVMLAKQTGLTRGQVSNWFINARVRLWKPMVEEMYTEEMKEQEGISGSQENNNNTNNNNNDRNSSRTTKEAGKEVVGSSPTKDSSSQLQDHHHHLQINSFQSNNNNNNPPDQSFTNHKHPHLTSQFLQCTSWTWN 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1037 561 FunFam BEL1-like homeodomain protein 9 398 460 - -
Bisa12g1037 561 SUPERFAMILY Homeodomain-like 396 462 IPR009057 -
Bisa12g1037 561 Coils Coil 277 304 - -
Bisa12g1037 561 MobiDBLite consensus disorder prediction 464 518 - -
Bisa12g1037 561 MobiDBLite consensus disorder prediction 127 188 - -
Bisa12g1037 561 CDD homeodomain 395 456 IPR001356 GO:0003677
Bisa12g1037 561 SMART prehox3 209 345 IPR006563 -
Bisa12g1037 561 Gene3D - 390 470 - -
Bisa12g1037 561 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 137 483 - -
Bisa12g1037 561 Pfam Homeobox KN domain 412 451 IPR008422 GO:0003677|GO:0006355
Bisa12g1037 561 SMART HOX_1 395 459 IPR001356 GO:0003677
Bisa12g1037 561 MobiDBLite consensus disorder prediction 471 518 - -
Bisa12g1037 561 MobiDBLite consensus disorder prediction 151 174 - -
Bisa12g1037 561 Pfam Associated with HOX 215 344 IPR006563 -
Bisa12g1037 561 ProSiteProfiles 'Homeobox' domain profile. 392 455 IPR001356 GO:0003677
Bisa12g1037 561 MobiDBLite consensus disorder prediction 525 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1037 Bisa-ChrBisa12 16788317 16791620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1037 1 518 Homeobox Transcription Factor Family AT2G35940 44.760 1.37e-110 343
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Bisa12g1037 POX 3.4e-46 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1037 12 16788317 16791620 Bisa02g3475 02 86208911 86212900 CCT
Bisa12g1037 12 16788317 16791620 Bisa12g1037 12 16788317 16791620 ECH