Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa12g1031 | ATGTGGAAGTTGTTACCCGTAAAAATAAGTAGTCCAACTAATCAAATGTCAACCTTCTACTTAGCTCCGATCTCGAAAAAATTGCTTGAATCTTGGGGTGAAGCAATGGATTTAGATTCCTCGATGGCACCGGAAAGCGATCACGATCCGGCCGTGCAGAACCATACCGGTTCTCATGCACCGGCAGCAATGGAGAGAGAGCAGCTAGGAGAGCAGCCATCGTCAGGAGGCGGATCTCCAGCACAGTCGCCAGTGCAGCAGCAACAGCAGCAGGCGGCTGCTCAGGTGCCGCAGAGTGCGGTTGTTGGACCAAGGCTGGCGCCAACTTACACTGTCGTGAATGCAATTTGTGAAAAGGAGGAGGATGGGCCAGGGCCGAGGTGTGGCCACACGCTGACGGCGGTGGCAGCTGTTGGAGAGGAGGGGACGCCTGGGTACATTGGTCCGAGGTTGATTTTGTTCGGGGGTGCCACTGCCCTTGAAGGGAGTTCTGCGGCTGCTGGGACTCCTTCATCCGCTGGGAATGCTGGCATACGTTTAGCTGGTGCTACAGCAGACGTCCACTGTTATGATGTCTTGACTAATAAATGGTCTAGGATAACTCCCTTTGGAGAACCTCCAACCCCAAGGGCTGCACATGTCGCAACTGCTGTAGGAACAATGGTAGTTATTCAGGGTGGCATTGGTCCTGCTGGTTTGTCAGCAGAGGACCTTCATGTTCTTGATCTCACTCAGCAACGGCCACGATGGCATAGAGTTGTTGTTCAAGGCCCTGGACCAGGGCCACGATATGGACATGTAATGGCTTTGGTGGGGCAGAGGTATCTTATGGCAATTGGAGGAAATGATGGAAAAAGACCTTTGGCTGATGTATGGGCCTTGGACACAGCCGCCAAGCCTTACGAATGGCATAAGTTGGAGCCAGAAGGAGAGGGCCCGCCTCCATGCATGTATGCAACTGCTAGTGCACGCTCTGATGGACTTCTTCTACTTTGTGGAGGGAGGGATGCCAATAGTGTGCCATTGGCTAGTGCATATGGACTTGCTAAGCATAGGGATGGTCGTTGGGAATGGGCAATTGCCCCTGGTGTTTCACCATCTCCAAGATATCAGCATGCAGCAGTATTCGTTAATGCAAGGCTCCATGTCTCTGGAGGAGCTCTTGGTGGAGGACGGATGGTGGAAGACTCATCAAGTGTTGCAGTGTTGGATACTGCAGCTGGTGTTTGGTGTGATACAAAATCTGTTGTTACCAGTCCAAGAACAGGTAGATACAGTGCTGATGCAGCTGGTGGAGATGCCTCAGTTGAATTGACACGGCGTTGTAGGCATGCAGCTGCTGCCATTGGTGACCTCATTTTTATTTATGGTGGTTTACGTGGTGGAGTGTTGCTTGATGACCTACTTGTTGCTGAAGATCTTGCTGCTGCTGAAACAACAAATGCTGCTTCACATGCTGCTGCAGTGGCAGCTGCATCTAATGTGCCAATAGGACGATTATCTGGGCGATATGGATTTGTTGATGATAGGACGAGGCAGACAATGCCTGAAGCAACTTCTGATGGTTCAGTTGTCCTGGGAAATCCCGTTGCCCCCCCTATAAATGGCGACATGTGTACTGATATCAGCACTGAAAATGCCATGCTTCAGGGACCCCGGAGAACTAACAAAGGGGTTGAGTATCTGGTTGAAGCATCAGCAGCAGAAGCTGAAGCTATCAGTGCCACATTAGCTGCTGCTAAAGCACGACAAGTGAATGGGGAAGTTGAATTGCCTGACAGAGACCGTGGGGCCGAGGCTACCCCAAGTGGGAAACCAATATCTTCCTTGATTAAGCCTGATTCAGCAGGGTCAAATAATATTGTTCCTGGTGGAGTTCGGTTGCATCATAGAGCTGTTGTTATTGCTGCAGAGACTGGTGGAGCATTAGGTGGTATGGTTAGACAGCTTTCGATTGATCAGTTTGAAAATGAAGGCAGGCGAGTCAGTTATGGGACTCCAGAAAATGCAACTGCTGCCCGAAAATTATTGGATCGGCAGATGTCTATCAATAGTGTCCCAAAAAAGGTCATAGCTCACCTATTAAAGCCTCGTGGCTGGAAACCACCAGTTCGCCGGCAGTTTTTCTTAGATTGCAATGAAATTGCAGATCTTTGTGATACTGCAGAGCGGATATTTTCAAGTGAACCAACTGTGTTACAACTTAAGGCACCGATTAAAATATTTGGTGATTTACACGGGCAGTTTGGGGATCTCATGCGTCTCTTTGATGAGTATGGTGCACCATCAACTGCTGGTGACATAGCATATATCGATTATCTATTCCTAGGAGATTATGTTGACCGCGGCCAACACAGCCTAGAAACTATAACCCTTCTACTTGCTCTGAAGGTTGAATATCCCCACAATGTACATTTAATACGTGGAAACCATGAAGCTGCGGATATTAATGCCCTCTTTGGTTTCCGAATTGAATGTATAGAGAGGATGGGTGAGAGAGATGGAATTTGGGCATGGCATCGGATTAATCGTTTGTTTAATTGGCTTCCTCTAGCGGCTCTAATTGAGAAAAAAATTATTTGCATGCATGGTGGTATTGGTCGTTCTATAAATCATGTGGAGCAGATTGAGAATCTTCAGCGTCCAATTACGATGGAAGCAGGGTCAATTGTGCTGATGGATCTATTGTGGTCTGATCCTACAGAAAATGACAGTGTAGAAGGACTGCGGCCAAATGCTAGAGGTCCAGGGTTAGTTACTTTTGGGCCTGATCGTGTCATGGAATTCTGCAACAACAATGATCTTCAGCTGATTGTTCGTGCACATGAATGTGTGATGGATGGATTTGAGCGTTTCGCCCAGGGACATCTGATTACTCTTTTTTCAGCTACAAATTACTGCGGTACCGCAAATAATGCTGGGGCAATATTAGTTTTGGGTAGAGATCTTGTTGTGGTTCCTAAACTGATTCATCCATTACCACCTGCAATTTCTTCACCAGAAGCATCGCCAGAGCGTCACATTGAAGATACGTGGATGCAGGAGTTGAATGCTAATAGACCACCGACTCCAACTAGAGGTCGTCCTCAAGTAGCAAATGATCGAGGTTCACTTGCTTGGATATAA | 3126 | 0.4792 | MWKLLPVKISSPTNQMSTFYLAPISKKLLESWGEAMDLDSSMAPESDHDPAVQNHTGSHAPAAMEREQLGEQPSSGGGSPAQSPVQQQQQQAAAQVPQSAVVGPRLAPTYTVVNAICEKEEDGPGPRCGHTLTAVAAVGEEGTPGYIGPRLILFGGATALEGSSAAAGTPSSAGNAGIRLAGATADVHCYDVLTNKWSRITPFGEPPTPRAAHVATAVGTMVVIQGGIGPAGLSAEDLHVLDLTQQRPRWHRVVVQGPGPGPRYGHVMALVGQRYLMAIGGNDGKRPLADVWALDTAAKPYEWHKLEPEGEGPPPCMYATASARSDGLLLLCGGRDANSVPLASAYGLAKHRDGRWEWAIAPGVSPSPRYQHAAVFVNARLHVSGGALGGGRMVEDSSSVAVLDTAAGVWCDTKSVVTSPRTGRYSADAAGGDASVELTRRCRHAAAAIGDLIFIYGGLRGGVLLDDLLVAEDLAAAETTNAASHAAAVAAASNVPIGRLSGRYGFVDDRTRQTMPEATSDGSVVLGNPVAPPINGDMCTDISTENAMLQGPRRTNKGVEYLVEASAAEAEAISATLAAAKARQVNGEVELPDRDRGAEATPSGKPISSLIKPDSAGSNNIVPGGVRLHHRAVVIAAETGGALGGMVRQLSIDQFENEGRRVSYGTPENATAARKLLDRQMSINSVPKKVIAHLLKPRGWKPPVRRQFFLDCNEIADLCDTAERIFSSEPTVLQLKAPIKIFGDLHGQFGDLMRLFDEYGAPSTAGDIAYIDYLFLGDYVDRGQHSLETITLLLALKVEYPHNVHLIRGNHEAADINALFGFRIECIERMGERDGIWAWHRINRLFNWLPLAALIEKKIICMHGGIGRSINHVEQIENLQRPITMEAGSIVLMDLLWSDPTENDSVEGLRPNARGPGLVTFGPDRVMEFCNNNDLQLIVRAHECVMDGFERFAQGHLITLFSATNYCGTANNAGAILVLGRDLVVVPKLIHPLPPAISSPEASPERHIEDTWMQELNANRPPTPTRGRPQVANDRGSLAWI | 1041 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa12g1031 | 1041 | ProSitePatterns | Serine/threonine specific protein phosphatases signature. | 807 | 812 | IPR006186 | GO:0016787 | |
| Bisa12g1031 | 1041 | Gene3D | - | 235 | 485 | IPR015915 | GO:0005515 | |
| Bisa12g1031 | 1041 | SUPERFAMILY | Metallo-dependent phosphatases | 695 | 1000 | IPR029052 | - | |
| Bisa12g1031 | 1041 | PRINTS | Serine/threonine phosphatase family signature | 844 | 870 | IPR006186 | GO:0016787 | |
| Bisa12g1031 | 1041 | PRINTS | Serine/threonine phosphatase family signature | 956 | 972 | IPR006186 | GO:0016787 | |
| Bisa12g1031 | 1041 | PRINTS | Serine/threonine phosphatase family signature | 806 | 830 | IPR006186 | GO:0016787 | |
| Bisa12g1031 | 1041 | PRINTS | Serine/threonine phosphatase family signature | 874 | 901 | IPR006186 | GO:0016787 | |
| Bisa12g1031 | 1041 | PRINTS | Serine/threonine phosphatase family signature | 738 | 765 | IPR006186 | GO:0016787 | |
| Bisa12g1031 | 1041 | PRINTS | Serine/threonine phosphatase family signature | 773 | 800 | IPR006186 | GO:0016787 | |
| Bisa12g1031 | 1041 | PRINTS | Serine/threonine phosphatase family signature | 934 | 954 | IPR006186 | GO:0016787 | |
| Bisa12g1031 | 1041 | PIRSF | STPPP_BSU1 | 75 | 1041 | IPR012391 | GO:0004721|GO:0009742 | |
| Bisa12g1031 | 1041 | SUPERFAMILY | Kelch motif | 182 | 471 | IPR015915 | GO:0005515 | |
| Bisa12g1031 | 1041 | MobiDBLite | consensus disorder prediction | 72 | 97 | - | - | |
| Bisa12g1031 | 1041 | SMART | pp2a_7 | 710 | 994 | IPR006186 | GO:0016787 | |
| Bisa12g1031 | 1041 | CDD | MPP_Bsu1_C | 690 | 992 | IPR041758 | - | |
| Bisa12g1031 | 1041 | MobiDBLite | consensus disorder prediction | 587 | 616 | - | - | |
| Bisa12g1031 | 1041 | FunFam | Serine/threonine-protein phosphatase | 674 | 1014 | - | - | |
| Bisa12g1031 | 1041 | Gene3D | - | 674 | 1016 | IPR029052 | - | |
| Bisa12g1031 | 1041 | FunFam | Serine/threonine-protein phosphatase | 106 | 303 | - | - | |
| Bisa12g1031 | 1041 | MobiDBLite | consensus disorder prediction | 1018 | 1041 | - | - | |
| Bisa12g1031 | 1041 | Pfam | Kelch motif | 368 | 414 | IPR011498 | GO:0005515 | |
| Bisa12g1031 | 1041 | Pfam | Calcineurin-like phosphoesterase | 738 | 945 | IPR004843 | GO:0016787 | |
| Bisa12g1031 | 1041 | Gene3D | - | 108 | 234 | IPR015915 | GO:0005515 | |
| Bisa12g1031 | 1041 | PANTHER | SERINE/THREONINE-PROTEIN PHOSPHATASE BSL3 | 36 | 1041 | - | - | |
| Bisa12g1031 | 1041 | MobiDBLite | consensus disorder prediction | 39 | 99 | - | - | |
| Bisa12g1031 | 1041 | FunFam | Serine/threonine-protein phosphatase | 307 | 507 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa12g1031 | Bisa-ChrBisa12 | 16587605 | 16600242 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa12g1031 | 702 | 937 | Calmodulin-binding Proteins | AT5G63870 | 29.412 | 4.73e-26 | 108 |
Event-related genes
| Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
|---|---|---|---|---|---|---|---|---|---|
| Bisa12g1031 | 12 | 16587605 | 16600242 | Bisa02g3467 | 02 | 86039309 | 86062473 | CCT |