Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1026 ATGGACCCCTTGATCCGCAAGTTCCGCCGCCGCCTTCTTGCATGGCTTCACCGATCTCGCTCCGGTCAGATATACTTTGTGGGGCGAATTCCGTACAAGGATGTTAAAAGGGCAACAGATGGTTTTCAAAGAATTGTATATAGCAATTCTCAAGTGGCTGCATATACGGCTAAATTTGAGGATGGTGGTGTTTTTTTGGTGAAAGAAGTAAAAGATTTTGATCAGGGAAATGACATTTTTTTCAGCGAAGTGCAATTCTTGGGCGGCTTGCATCATCGCCACCTTCTGTCACTCAAGGGGTTTTCCGTGAGACATAAGAGATTGCTCATTTTTGACAACATAGAGAATGGAAGCCTAAAGGAGCATCTAAATGATCCCCTGAAGACTCCCTTAAATTGGAGGACAAGGTTACAAATTGCTATGGGCGTTGTGGCCGCCCTGGAATACTTGTTTCTCTTTACTGAACGACCGTTATGTAATGTCTCCATCAGCTCTAGCAACATCATGTTAGATGAGAATTTTACAGCTAAACTATCTGATTTTGGCCTTCTTACTTGTGAAAGTCCTGTTATGATGCCATTTTCCAAAGATGATAGCATGGGGCAGAAAAGTGCTAACATAATATTCCAACTTGGAGTGTTTATACTAGAACTGGTCACTGGTCAGTCTTCAGAGATGGAAGGTTCCGATATAATCCAATGGATCCAAGAATCACGCTTTTACAGTTCCATACATAATATGATAGACCCTGATCTTGGAGACAATTATGATTCTAGGGAGTTAAAAAGCCTTCTAGCTGTTGCAAAGTTATGTATCAGATCAAGGGACAAGCCTGTATTTACAATCCGCCAGTTATTTCGGTATCTTCAACAGAAGGTAGATATACCCCGTGTCTAG 897 0.4181 MDPLIRKFRRRLLAWLHRSRSGQIYFVGRIPYKDVKRATDGFQRIVYSNSQVAAYTAKFEDGGVFLVKEVKDFDQGNDIFFSEVQFLGGLHHRHLLSLKGFSVRHKRLLIFDNIENGSLKEHLNDPLKTPLNWRTRLQIAMGVVAALEYLFLFTERPLCNVSISSSNIMLDENFTAKLSDFGLLTCESPVMMPFSKDDSMGQKSANIIFQLGVFILELVTGQSSEMEGSDIIQWIQESRFYSSIHNMIDPDLGDNYDSRELKSLLAVAKLCIRSRDKPVFTIRQLFRYLQQKVDIPRV 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1026 298 Gene3D Transferase(Phosphotransferase) domain 1 114 295 - -
Bisa12g1026 298 SMART tyrkin_6 45 286 IPR020635 GO:0004713|GO:0006468
Bisa12g1026 298 Pfam Protein tyrosine and serine/threonine kinase 66 184 IPR001245 GO:0004672|GO:0006468
Bisa12g1026 298 ProSiteProfiles Protein kinase domain profile. 32 298 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g1026 298 PANTHER OS01G0253100 PROTEIN 27 293 - -
Bisa12g1026 298 FunFam probable receptor-like protein kinase At1g49730 208 297 - -
Bisa12g1026 298 FunFam Protein kinase superfamily protein 16 112 - -
Bisa12g1026 298 SUPERFAMILY Protein kinase-like (PK-like) 26 266 IPR011009 -
Bisa12g1026 298 Gene3D Phosphorylase Kinase; domain 1 16 112 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1026 Bisa-ChrBisa12 16544237 16546537 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1026 22 294 Receptor kinase-like Gene Family AT3G19300 33.893 2.00e-50 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_URK-1 Bisa12g1026 PK_Tyr_Ser-Thr 2.6e-14 CL0016