Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1023 ATGTCAATGGACATGATGGCAACTACCGAACGTGTTTGTTATGTTCACTGCAACTTCTGCAACACCATTCTTGCGGTAAGTGTTCCATGCAGCAGTTTGCTTAACATAGTGACGGTTAGATGTGGGCATTGTGCTAATTTGCTATCAGTTAACGTGGGAGCATCATCTCTCCAAACATGTCCTCCTCAAGACGTTCAGTCACAAAAACAGCACCTAGGCTTAGAAGAATCAAGCACCAAAGAAGCGGGATCATCTTCAAAATGCAGCAAATTTGCTGAATTTGAATCTGTAGAGCATGAGCAACATAGGATTCCTCCCATTCGTCCCCCTGAGAAGAGACAACGTGTGCCTTCTGCTTATAACCGCTTCATCAAGGAGGAAATCCAAAGGATTAAGGCTAGTAATCCAGACATCAGTCACAGGGAGGCTTTTAGCACAGCAGCCAAAAATTGGGCACATTTTCCTCATATTCACTTTGGGTTAAAGCTGGATGGGAACAATCAAGCAAAGTTGGACCATGGGGAAGGAACTCAAAAGTCTAAGGGGTTTTATTGA 555 0.4378 MSMDMMATTERVCYVHCNFCNTILAVSVPCSSLLNIVTVRCGHCANLLSVNVGASSLQTCPPQDVQSQKQHLGLEESSTKEAGSSSKCSKFAEFESVEHEQHRIPPIRPPEKRQRVPSAYNRFIKEEIQRIKASNPDISHREAFSTAAKNWAHFPHIHFGLKLDGNNQAKLDHGEGTQKSKGFY 184
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1023 184 CDD HMG-box_SF 115 151 - -
Bisa12g1023 184 Gene3D High mobility group box domain 98 156 IPR036910 -
Bisa12g1023 184 FunFam Axial regulator YABBY 106 176 - -
Bisa12g1023 184 PANTHER PROTEIN YABBY 6-RELATED 5 170 IPR006780 GO:0007275
Bisa12g1023 184 SUPERFAMILY HMG-box 104 154 IPR036910 -
Bisa12g1023 184 Pfam YABBY protein 8 161 IPR006780 GO:0007275
Bisa12g1023 184 MobiDBLite consensus disorder prediction 68 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1023 Bisa-ChrBisa12 16452332 16458296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1023 1 184 C2C2-YABBY Transcription Factor Family AT1G08465 64.362 6.82e-81 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bisa12g1023 YABBY 5.6e-72 CL0114