Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1021 ATGGAGGGTTCGGGGTTGGAGGAGAATAAGAAGTCTGAAGCGCATTTGACTTCAGCTGCTGCTTTTGTGGAGGGTGGAATCCAGGATGCTTGTGACGATGCTTGCAGCATATGTCTTGAAGCATTTTGTGATAGCGATCCTTCAACAGTGACAAGTTGCAAGCACGAGTTTCATCTTCAATGCATTCTAGAATGGTGTCAGAGAAGTTCTCAATGCCCCATGTGCTGCCAACCCATCAGTCTCAAAGATCCAACCAGCCAGGAATTGCTTGAGGCAGTGGAAAGAGAGAGAAATATTAGGTTGAATCCATCTAGAAATGCCACAATATTTCATCATCCAGCTCTGGGGGATTTTGAGTTACAGCATTTGCCTGTTGGTGCAAATGATGCTGATCTTGAAGAGCGTATAATCCAACACTTAGCTGCTGCTGCTGCAATGGGAAGAGCACGCCATATTGCTAGAAGGGAAGGCCAGAGAAACAGGTCATCAGCTCAAAGTCGCCCACATTTTTTGGTATTTTCATCTCATCCTAATTCATCTCCTGTTGCTCCTGCCTCTCCAACTCATGGGGGGGATGGTGAACAAACTTCACCAATCACTGTTTCCACTCTATCTCCTCCAACTCATGCTGCTGGGGAAGAATCATCACAGCCAGCTTCTGTTCCTTCTGTTCAAGCAGACCAGGTTTCTGCTTCAGGATCTGGATCTACTGCACTTGCTTCTGATCACCAAGGACCATCGTACAACAGTAGGAGATCTCCTAGTCAGTCATCTCCAAGTAGTCAAGACAGAGCAGGGCCATCTGAATTCCAATCATTTTCAGAATCTCTGAAGTCTAGATTAAATGCAGTTTCAACGAGATACAAAGAGTCAATTTCCAAGAGCACAAGAGGTTGGAAGGAGAAATGGTTCTCTCGCAATAGCTCTATGTCTGATCTGGGATCTGAAGTCAGACGAGAGGTTAATGCAGGGATTGCAACTGTATCACGCATGATGGAACGTCTAGAAACCAGAGACAGCAATAGAATTAATAGCAATTCTTCTCCCAGTCATTTAGAAGATGGGTCAGTTGCAGGATCAGATGATCGCCGTATATCAGACACTGAAGGTGACAGTATTTTGAGAGACAATAATGCAAAATCATCTTGTGCTGCAGGTTCTAGTTCAAATCAAGCACATTGA 1182 0.4475 MEGSGLEENKKSEAHLTSAAAFVEGGIQDACDDACSICLEAFCDSDPSTVTSCKHEFHLQCILEWCQRSSQCPMCCQPISLKDPTSQELLEAVERERNIRLNPSRNATIFHHPALGDFELQHLPVGANDADLEERIIQHLAAAAAMGRARHIARREGQRNRSSAQSRPHFLVFSSHPNSSPVAPASPTHGGDGEQTSPITVSTLSPPTHAAGEESSQPASVPSVQADQVSASGSGSTALASDHQGPSYNSRRSPSQSSPSSQDRAGPSEFQSFSESLKSRLNAVSTRYKESISKSTRGWKEKWFSRNSSMSDLGSEVRREVNAGIATVSRMMERLETRDSNRINSNSSPSHLEDGSVAGSDDRRISDTEGDSILRDNNAKSSCAAGSSSNQAH 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1021 393 SUPERFAMILY RING/U-box 28 83 - -
Bisa12g1021 393 ProSiteProfiles Zinc finger RING-type profile. 35 75 IPR001841 -
Bisa12g1021 393 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 84 IPR013083 -
Bisa12g1021 393 FunFam E3 ubiquitin-protein ligase RHF2A 6 109 - -
Bisa12g1021 393 MobiDBLite consensus disorder prediction 171 274 - -
Bisa12g1021 393 MobiDBLite consensus disorder prediction 356 374 - -
Bisa12g1021 393 PANTHER ZINC FINGER, RING/FYVE/PHD-TYPE 16 84 - -
Bisa12g1021 393 SMART ring_2 35 75 IPR001841 -
Bisa12g1021 393 Pfam Ring finger domain 34 75 IPR001841 -
Bisa12g1021 393 MobiDBLite consensus disorder prediction 337 393 - -
Bisa12g1021 393 MobiDBLite consensus disorder prediction 375 393 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1021 Bisa-ChrBisa12 16416740 16421512 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1021 32 75 C3H Transcription Factor Family AT5G15790 50.000 5.41e-11 60.5