Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1019 ATGCATAACGGTATGAATATGATGGATCCTGAACTGATTAGGATGGCTCAGGAGCAGATGAGTCGCATGTCACCTGCCGAGTTGGCTCGGATCCAACAGCAGATGATGTCTAATCCAGAGATTATGAGGATGGCTTCGGAAAGCATGAAGAACATGAGGGTTGAAGACCTTAAATTTGCTGCAGAACAGTTAAAGAATTCCCGCCCAGAAGAAATGGCTGAAATTGGTGAGAAGATGGCTAACGCAACACCTGAAGAAATAGCATCTATGCGTACCCGTATGGATGCCCAGATCAAATATGAATTGAGTGCAGCTGAGATACTGAAGAAGCAGGGGAATGAATTTCACAGTCAAGGAAGGTTCCAGGACGCTATGCAGAAGTACCAGCTTGCTAAGAAAAATATTAAAGATATTCCATCTTCCCAAAGTAGAAAGCTTCTTTTGGCTTGCTCGCTCAACTTGATGTCCTGTTACTTGAAGACAAAGCAGTATGATGAATGCATAAAAGAAGGAACTGAGGTTTTGGCATATGATGCAAAGAATCTTAAGGCTCTTTATCGAAGAGGTCAAGCATATAAGGAAATAGGTCTACTAAAGGATGCTGTTATTGATTTGAGCATGGCACTTGAAGTGTCCCCCGATGATTATACAATTGCTGAGGTTTTAAGGGACACCAATGAAAGGTTGACAAAGGAAGGTGGCGAGCATGCACCTGAACGATTGGTAATAGAAGAGATAACTGAAGAAGTTGAAAATGCGCCTTCTGGAAACTCTGTGGGACACACTGTGGGTCAACCAAAAAAACCCGATAACTCTTCTAAGAGTTTCAATACAATCAATAAAGGAAATCTGAAAACCAATACAGAGGATTTAAATAAACTGAAAAATGACCCAGATGCCATCAGATCCTTCCAAAATTTCACTTCAAATGCCAATCCTGCCACTCTGGCTTCTTCGAATGTTGAACAATCCAGAGATGTCCCTCCTGATATGATTAGAACTGCCTCAAATATGATCAGCGAGATGTCACCCCAGGAACTTCAAAATGTGCTTGATATGGCTTCCTCGTTTCAAGGGGACAACCCATTTAGAGGAGGTTCCCCTGATTCTACTCTCAACCCTGGATCAAATCCTGACGTGACACCTGACATGTTCAGAAAAGCAAGTGATATGATAAGCAAAATGTCACCAGAGGATCTTCAGAAGATGTTTGACATGGCATCCTTATTGAAGGGGAAAGAATTCATTTCATCGTCTGCTGCTGTGGACAACAATGTGAGAAATGCATCTTTGTCAAACTTATCATCCTCAAGTGCTGATGGAACTGATGCTTTTGGTGAAGCTAGCCCTTCTCACAATGCATTTTCAAATGTGAGAAATGCTTCTCAGTCAAATTTCCCGTCCTCAAGTGCTGATTTGCAAGAACAGATGAGAAACCAGATGAAAGATCCAGCTATGCAACAGATGTTCTCATCAACGATTAAAAATATGAGCCCAGAAATGATGGCAAACATGGGCAAACAATTTGGTTTTAAGCTTTCACAAGAAGATGCAACAAAAGCTCAACAAGCCATGTCATCCTTGTCACCAGAGGACCTGGATAGAATGATGCGTTGGGCAGAGAGGATGCAGAGAGGGGCTGAAGGTGTTAAAAAGACGAAGAACTGGCTGCTAGGCAAACCTGGTTTGATCTTGGCAATATGCATGCTCATTTTGGCTGTGGTTCTTCATCGACTGGGCTTCTTTGGTGGCTAG 1755 0.4239 MHNGMNMMDPELIRMAQEQMSRMSPAELARIQQQMMSNPEIMRMASESMKNMRVEDLKFAAEQLKNSRPEEMAEIGEKMANATPEEIASMRTRMDAQIKYELSAAEILKKQGNEFHSQGRFQDAMQKYQLAKKNIKDIPSSQSRKLLLACSLNLMSCYLKTKQYDECIKEGTEVLAYDAKNLKALYRRGQAYKEIGLLKDAVIDLSMALEVSPDDYTIAEVLRDTNERLTKEGGEHAPERLVIEEITEEVENAPSGNSVGHTVGQPKKPDNSSKSFNTINKGNLKTNTEDLNKLKNDPDAIRSFQNFTSNANPATLASSNVEQSRDVPPDMIRTASNMISEMSPQELQNVLDMASSFQGDNPFRGGSPDSTLNPGSNPDVTPDMFRKASDMISKMSPEDLQKMFDMASLLKGKEFISSSAAVDNNVRNASLSNLSSSSADGTDAFGEASPSHNAFSNVRNASQSNFPSSSADLQEQMRNQMKDPAMQQMFSSTIKNMSPEMMANMGKQFGFKLSQEDATKAQQAMSSLSPEDLDRMMRWAERMQRGAEGVKKTKNWLLGKPGLILAICMLILAVVLHRLGFFGG 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1019 584 MobiDBLite consensus disorder prediction 356 384 - -
Bisa12g1019 584 ProSiteProfiles TPR repeat profile. 182 215 IPR019734 GO:0005515
Bisa12g1019 584 MobiDBLite consensus disorder prediction 356 378 - -
Bisa12g1019 584 MobiDBLite consensus disorder prediction 251 327 - -
Bisa12g1019 584 MobiDBLite consensus disorder prediction 299 325 - -
Bisa12g1019 584 SUPERFAMILY TPR-like 98 227 IPR011990 GO:0005515
Bisa12g1019 584 Gene3D Tetratricopeptide repeat domain 91 236 IPR011990 GO:0005515
Bisa12g1019 584 SMART tpr_5 182 215 IPR019734 GO:0005515
Bisa12g1019 584 SMART tpr_5 148 181 IPR019734 GO:0005515
Bisa12g1019 584 SMART tpr_5 105 138 IPR019734 GO:0005515
Bisa12g1019 584 MobiDBLite consensus disorder prediction 251 287 - -
Bisa12g1019 584 PANTHER TPR_REGION DOMAIN-CONTAINING PROTEIN 5 361 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1019 Bisa-ChrBisa12 16373425 16378329 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1019 102 215 Calmodulin-binding Proteins AT5G48570 36.667 5.04e-15 76.3