Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1009 ATGGCCAGAGGGGGTGGACTCTCCATTGATTCAGAAACCTTCTTCCTCCACAGACCCATCGCAGTTCTCAACTCTTTCCCTCAAGATCATACCGAAACCCCCAACTGGAAGTCCAAGCTCAGTCCCAGTCCCACCATGGATGGCACCAAGAGGTCTCCTTCCAGTTCCATCCCCTTCCAAGTCAATCTCAACTCCGACGACTCCAGGCCCCACATCGACGAGATGGACTTCTTTCCACGCGCCACCACCGACGACGACAAGCTCGCCTCCTCCTCCGCCTCCGCCTCCGCCTCTCAAGATCGTAAACCGGATCTCTCTTCCATTTCCCCTCTCTTGCCTTTCAAAACTGGTCTGAATCTCCTTACTACTAACACCAGCAGTGACCATTCCATGGTGGAAGACGGGTTATCAGTATCAGCTGTTTCTGATGATAGAAGAGCAAAGGGTGAGCTTGCTGTTGTTAAAGCAGAGCTGCAGCGAATGAAGATGGAGAATCATCGGTTGAGGGACATGCTTGAGCAGATGAACACCAGTTACAATGGGCTGCAAACGCACTTAATGAATTTGATGCAGAAACAGAAGGCTAATCAGGACACAGAAGAAGGAGAACAAGAAGAAGAAGAGAAGAAACCAGGCGGGAATGGTGGAGTCTTAGTGCCTAGGCAGTTCATGGATCTTGGCCTCGCGTCTAATGCTGGTGATGCCGATGATCATTCTCTTTCTTCGGGAAGAAGTCAGGATAGATCGCCACCAGGACATAACACGGAAGTGGCTTCCAGAGAACTTGGGTCACGAAGGATTGATGGGATCGTCGATGATGAGAAGGAATTAGGGAGGGAGATTGAAAGAGAAGATAGCCCTCCAGCTCAAGCTTTAGCTGCTAACAAGTTTCCCAGGTTTAATCCTTCAGAGAATGTTGATCAAGCTGAAGCCACCATGCGAAAGGCCAGAGTATCTGTTCGAGCTCGATCAGAAGCTCCCATGATCACTGATGGATGTCAATGGCGAAAGTATGGTCAAAAGATGGCCAAAGGAAACCCGTGTCCTCGAGCTTATTATCGATGCACCATGGCTGCTGGTTGCCCTGTTAGAAAACAGGTACAGAGGTGTGCAGAGGACAGGACAATTCTGATCACAACGTACGAAGGGAACCACAACCACCCTCTGCCGCCGGCGGCGATGGCGATGGCACAGACAACCTCGTCAGCAGCGAGAATGCTACTTTCAGGATCAATGTCGAGCAATGATGGGTTGATGAATGCGAATTTTCTCACAAGGACACTCCTTCCTTGTTCCTCTAGCATGGCTACAATCTCTGCTTCAGCTCCATTTCCGACTGTTACATTGGACCTAACCCAATCCCCTAACCCCTTAACCTTCCCGAGGCCGCCGAGCCAGTTCCAAATCCCCTTCCCCGCCGGCGTCCCTCACGGCTTCGGCGGCTTGCCGGCGTCGTTGCTGCCTCAGATATTCGGTCAGGCGCTTTACAACCAATCCAAGTTTTCTGGGCTTCAGATGTCTCAGGACAATGCAGAGAATTCGCAGTTGGGTGGCCAGTCGTCGTCCCAGCAGCCGCCGCATCTTGGTGACACGGTCAGCGCTGCCACCGCCGCAATTGCCGCGGACCCCAACTTCACGGCGGCTCTGGTGGCGGCTATCACTTCCATTATCGGCGGCGCGCAGACAAACAACAACAATAATAATAGTAGCAGTAATGCTAATGTCGCCGCCGGCAACAGCAATGGTAATGTTCCGACGAGCAACAATAATAGTAGTACCAATGGAAGCAATAAAATCAGCAATCCGAATTTCTCGGGGAATTAA 1824 0.5148 MARGGGLSIDSETFFLHRPIAVLNSFPQDHTETPNWKSKLSPSPTMDGTKRSPSSSIPFQVNLNSDDSRPHIDEMDFFPRATTDDDKLASSSASASASQDRKPDLSSISPLLPFKTGLNLLTTNTSSDHSMVEDGLSVSAVSDDRRAKGELAVVKAELQRMKMENHRLRDMLEQMNTSYNGLQTHLMNLMQKQKANQDTEEGEQEEEEKKPGGNGGVLVPRQFMDLGLASNAGDADDHSLSSGRSQDRSPPGHNTEVASRELGSRRIDGIVDDEKELGREIEREDSPPAQALAANKFPRFNPSENVDQAEATMRKARVSVRARSEAPMITDGCQWRKYGQKMAKGNPCPRAYYRCTMAAGCPVRKQVQRCAEDRTILITTYEGNHNHPLPPAAMAMAQTTSSAARMLLSGSMSSNDGLMNANFLTRTLLPCSSSMATISASAPFPTVTLDLTQSPNPLTFPRPPSQFQIPFPAGVPHGFGGLPASLLPQIFGQALYNQSKFSGLQMSQDNAENSQLGGQSSSQQPPHLGDTVSAATAAIAADPNFTAALVAAITSIIGGAQTNNNNNNSSSNANVAAGNSNGNVPTSNNNSSTNGSNKISNPNFSGN 607
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1009 607 MobiDBLite consensus disorder prediction 567 607 - -
Bisa12g1009 607 Coils Coil 190 210 - -
Bisa12g1009 607 MobiDBLite consensus disorder prediction 192 271 - -
Bisa12g1009 607 MobiDBLite consensus disorder prediction 508 530 - -
Bisa12g1009 607 MobiDBLite consensus disorder prediction 26 109 - -
Bisa12g1009 607 Coils Coil 151 178 - -
Bisa12g1009 607 MobiDBLite consensus disorder prediction 235 253 - -
Bisa12g1009 607 Pfam WRKY DNA -binding domain 331 388 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa12g1009 607 MobiDBLite consensus disorder prediction 67 83 - -
Bisa12g1009 607 FunFam probable WRKY transcription factor 31 314 391 - -
Bisa12g1009 607 MobiDBLite consensus disorder prediction 26 66 - -
Bisa12g1009 607 MobiDBLite consensus disorder prediction 85 105 - -
Bisa12g1009 607 Gene3D WRKY domain 314 391 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa12g1009 607 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 125 569 IPR044810 GO:0003700
Bisa12g1009 607 ProSiteProfiles WRKY domain profile. 324 390 IPR003657 GO:0003700|GO:0006355|GO:0043565
Bisa12g1009 607 SUPERFAMILY WRKY DNA-binding domain 322 390 IPR036576 GO:0003700|GO:0006355|GO:0043565
Bisa12g1009 607 SMART WRKY_cls 329 389 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1009 Bisa-ChrBisa12 16219351 16221645 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1009 59 568 WRKY Transcription Factor Family AT1G62300 49.905 1.27e-135 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Bisa12g1009 WRKY 3.3e-24 CL0274
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g1009 12 16219351 16221645 Bisa02g3432 02 85283024 85285891 CCT
Bisa12g1009 12 16219351 16221645 Bisa12g1009 12 16219351 16221645 ECH