Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g1002 ATGAGGAAGGGGCCGTGGACAGCAGAAGAAGACTCGATGCTGATAGATTACGTGAACAAGTATGGCGAGGGAAACTGGAATAACGTCCACAAGAACTCTCCCCTCGCTCGCTGCGGTAAGAGTTGTAGACTCCGATGGGCCAACCACCTCCGCCCCAATCTCAAGAAAGCCCCCTTCTCTCTTTACGAACAGTCCATCATCATCCACCTTCACTACAAGCTCGGTAACAAATGGGCTCGCATGGCCTCCCTGGTAATTTGTATACACCTATACATATATCTGCACTGCATGTCCATTGTCCACTCACTTGGCTTTTCAACCTCATCTTTAATTCATTGCTTCATTCTCAGTTTACCAGGGAGGACAGACAACGAAATAAAGAACTTCTGGAATACGAGGATGAAAAGAGCCCTGAAAGCAGCCGGCTCGCCTGTTAATCCTCTCCCATTTCAAGACGCACACCCTCCCTACCAACGCCATTACTTTACACAACCTCCCTCTTTCTCTTTTCCTTCTTCTCATTCTGCTCTTCACGCCCACCCATTCTCTAATACCCTTCTGAGTCTCCCGTTATCTCCATATGGCTCCTCCTCCTCCTCCTCATCGTCGTCGTCTTCCACTCTCCAAAATCATGGCTTTGCCGCTACTGATCACTCTGTTGACTATGGTTTCATCAATTCCAGTGCTGTGACATTAGGATCTCTGTATGAACCCCTTCCTCTGGTGCCTGGCTTGAGTACCGAGATCTCTTCCTGCCAAAAACCTCCTCCTAACGCTAGCCTTGCTATGGACTACTATGAAGCAGCACCTTTGGGTCAACCAAACAGCGGCCTGCTGGAGGATCTAGTGGTGGAAGCTCGAGCCTTTGCTCGCCATGAAAAGTACTCAAAGAATGAAGACTCAAATTCAATCCCAGGAAGGGAGTCATCATCCCTGGGCGCTGAGAAATCAGCTGTGACTAAAAAGAATCCTAAAGGCGATGCTGCTGCTGCTGCTGATACTGATGAGAGGAATGTATTTCGCTTATTCCCATTATCGACAGAGAAGAAACCATTGGAGGAGGACGATGACCCGTTCAGCCTGCTCAACAATTACTCCTCAGAAATGCCAATGCTTGAGTGGTACAGCGGAGGAGGAAGGCAATCATTGGAATTTGAAAGTCAAGCAGACACCTTACCTGACTCTACTGATCAGGAATTTGCCTGGGCTGTCGGAGATTGCTGGAGCAACATACCTAGAATATGCTAA 1248 0.4832 MRKGPWTAEEDSMLIDYVNKYGEGNWNNVHKNSPLARCGKSCRLRWANHLRPNLKKAPFSLYEQSIIIHLHYKLGNKWARMASLVICIHLYIYLHCMSIVHSLGFSTSSLIHCFILSLPGRTDNEIKNFWNTRMKRALKAAGSPVNPLPFQDAHPPYQRHYFTQPPSFSFPSSHSALHAHPFSNTLLSLPLSPYGSSSSSSSSSSSTLQNHGFAATDHSVDYGFINSSAVTLGSLYEPLPLVPGLSTEISSCQKPPPNASLAMDYYEAAPLGQPNSGLLEDLVVEARAFARHEKYSKNEDSNSIPGRESSSLGAEKSAVTKKNPKGDAAAAADTDERNVFRLFPLSTEKKPLEEDDDPFSLLNNYSSEMPMLEWYSGGGRQSLEFESQADTLPDSTDQEFAWAVGDCWSNIPRIC 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g1002 415 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 1 386 - -
Bisa12g1002 415 Gene3D - 3 55 - -
Bisa12g1002 415 ProSiteProfiles Myb-like domain profile. 1 50 IPR001005 -
Bisa12g1002 415 MobiDBLite consensus disorder prediction 294 333 - -
Bisa12g1002 415 MobiDBLite consensus disorder prediction 302 317 - -
Bisa12g1002 415 Pfam Myb-like DNA-binding domain 3 50 IPR001005 -
Bisa12g1002 415 FunFam MYB-related transcription factor 2 55 - -
Bisa12g1002 415 SUPERFAMILY Homeodomain-like 4 80 IPR009057 -
Bisa12g1002 415 Gene3D - 58 137 - -
Bisa12g1002 415 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 54 IPR017930 -
Bisa12g1002 415 ProSiteProfiles Myb-like domain profile. 51 134 IPR001005 -
Bisa12g1002 415 SMART sant 55 136 IPR001005 -
Bisa12g1002 415 SMART sant 2 52 IPR001005 -
Bisa12g1002 415 CDD SANT 5 50 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g1002 Bisa-ChrBisa12 16093725 16095554 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g1002 1 151 MYB Transcription Factor Family AT2G32460 54.967 1.05e-45 162
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa12g1002 Myb_DNA-binding 1.1e-13 CL0123