Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0986 ATGGCTATAGCTAGAACATTACTCCTCCTGGTTGTCTGGGTATGGGTTCCCACAGAAATTGTGGGTAGGACAGTAAATAGTAATAAAGTAAATAATACTGTTCCTTCAAAACCGAATGTCGTGAGAATAGGAGCCCTGTTTACTGTCAATTCGGTCATTGGAAGATCGGCTAAACCCGCCCTTTTGGCTGCCGTGGAGGATGTTAATTCTGATACAAGCATTCTCAGCGGGATTGAACTGGAAGTTCTTTTACATGATACAAACTGCAGTGGATTTCTTGGAACTGTGGAAGCTCTGCAGCTGATGGAGAATGATGTGGTTGCTGCCATTGGTCCACAGTCCTCTGGAATAGCTCATGTCATCTCCCATGTTGTGAATGAACTCCATGTACCTCTTCTGTCATTTGGGGCAACCGATCCTACTCTTTCTTCTCTGCAGTACCCATATTTTATCCGCACTACCCAGAATGACTATTTTCAGATGTATGCAATTGCAGATTTGCTTGAACATTATGGATGGAGGGAAGTAATTGCCATTTTTGTGGATGATGATAATGGAAGAAATGGAATTTCTGTATTAGGTGATGCCCTGGCACAAAAACGTGCCAAGATCTCTTATAAGGCTGCCTTCCCTCCCAGTGCTTCCAGAACTGCAATAAGTGACTTGTTAAATGGAGTAAACTTAATGGAATCACGGGTCTATGTTCTGCATGTAAATCCTGATTCTGGTTTGACAATTTTTTCTCTTGCCAAGAAGCTAGGGATGATGAGCAGTGGCTATGTTTGGATTGCAACTGATTGGCTTCCTTCAGTGCTAGATTCACAAGAACCAGCTAACCTTGACATGATGAATCTTTTACAAGGGGTTGTTGCTCTTCGTCATCACACTCCTGATACTGATCTCAAAAAGACTCTTATCTCTAAGTTAAAAGCCCTAAAGGCCAATAAAACTGCAGGCTTCAATTCTTATGCATTATATGCTTATGACACTGTTTGGTTAGCAGCCCATGCTTTGGATGTTTTTCTCAGTGAAGGTGGAAACTTATCTTTCTCTGATGACCCTAGGCTGCATGACACAAATGGAAGCTTGTTGCATTTATCATCACTTCGAACATTTGATGGTGGCCCACAGTTTCTCCAGACGATCCTGAGAATGAACTTCACTGGTGTGAGTGGTCAAATTGCGTTTGATATGGACAAGAATTTAATTCATCCAGCATATGATATTCTAAACATCGGTGAATCTGTACCCCATATAATTGGTTATTGGTCTAATTACTCTGGTCTTTCAAACGTAGTTCCCGAAACTGTATACTCAAAACCTCCTAACAGTTCTGCTGGCAATAAACATCTAAACAGTGTGATATGGCCAGGAGAGATAACAACTACACCCAGGGGATGGATATTCCCCGATAATGGAAAGCCACTGCGGATTGCAGTGCCAAACAGAGTAAGCTACACGGAGTTTGTCAGAAAAGACAATAACCCCCCAGGGGTAAAGGGCTATTGCATTGATGTCTTTGAAGCAGCAATAAATTTGTTGCCTTATCCTGTCCCTCGGAAATATATGTTATATGGACATGGTGATAGAAATCCTGACTACAACGACCTTGTGAATCAAGTTGCACAAGATAACTTTGATGCAGCTGTTGGAGATATTACAATTGTCACAAATAGGACAAGGATTGTGGATTTTACTCAACCTTACATGGCGTCAGGGCTGGTTGTAGTTGTTCCTGTCAAAGAGATAAAGTCAAGTCCTTGGTCTTTCCTCAAGCCATTTACTGCACAAATGTGGTGTGTCACTGGTGCTTTCTTTCTTTTCGTGGGAGCTGTTGTTTGGATTCTTGAACACCGGCACAATAATGAATTCCGTGGGCGACCAAGGAAACAACTTGTGACAATTTTTTGGTTTAGCTTCTCAACAATGTTTTTCTCACACAGAGAGAACACTGTGAGTGCTCTGGGGCGATTGGTGTTACTCATATGGCTTTTTGTGGTGTTAATTATTAATTCAAGCTACACAGCTAGCTTGACATCCATCCTCACAGTGCAGCAACTCTCATCCCAAATCGAAGGCATTGACGGTTTGATCTCAAGTAATCAACCAATTGGAATTCAAGATGGGTCATTTGCCCGAAAGTATCTCACAGATGAGCTGAACATAGCTGCATCTAGGATTGTTACATTGAAAAATCAGCAGGACTATATCGATGCCCTTCTGCGTGGACCGAAAAATGGAGGGATAGTGGCTGTTGTTGATGAGCTTCCTTATATTGAGCTCTTAATGTCTAACACCAACTGTAAGTTCAGAACTGTAGGGGAAGAGTTTACTAAAAGCGGATGGGGATTCGTATTCCAAAGGGACTCTCCGCTCGCAGTGGACTTATCAACAGCAATTCTTCAACTGTCGGAGAACGGAGACCTGCAAAAGATCCATGACAAATGGCTGTTGAGAAGTGAGTGTACAGCAGTTTCACATGACGGTGAAGAAGATTCAAACCAGCTATCATTGAGTAGCTTCTGGGGGCTTTTCCTCATATGTGGAATTGCATGCCTCCTTGCTTTGATTGCCTTCTGTATCAGGGTGTTCTGCCAATTTACCAAATTCACCACAGAACCAGAGGAGGAGGCTGGGGAGGAAATACCGCCACCCATGGCGAGGCCAAGACGCCCCACCCGGACTACTAGCTTCAAGAACTTGATCCTTTTTGCTGATAAAAAAGAAGCTGAGATCAAAGAGAAACTCAGGAAGAGTAGTAAGAAACGACGACGCAGCCACAGCTCAGAGTGGGAATCCAGTTCCCCCATTTTATAA 2817 0.4288 MAIARTLLLLVVWVWVPTEIVGRTVNSNKVNNTVPSKPNVVRIGALFTVNSVIGRSAKPALLAAVEDVNSDTSILSGIELEVLLHDTNCSGFLGTVEALQLMENDVVAAIGPQSSGIAHVISHVVNELHVPLLSFGATDPTLSSLQYPYFIRTTQNDYFQMYAIADLLEHYGWREVIAIFVDDDNGRNGISVLGDALAQKRAKISYKAAFPPSASRTAISDLLNGVNLMESRVYVLHVNPDSGLTIFSLAKKLGMMSSGYVWIATDWLPSVLDSQEPANLDMMNLLQGVVALRHHTPDTDLKKTLISKLKALKANKTAGFNSYALYAYDTVWLAAHALDVFLSEGGNLSFSDDPRLHDTNGSLLHLSSLRTFDGGPQFLQTILRMNFTGVSGQIAFDMDKNLIHPAYDILNIGESVPHIIGYWSNYSGLSNVVPETVYSKPPNSSAGNKHLNSVIWPGEITTTPRGWIFPDNGKPLRIAVPNRVSYTEFVRKDNNPPGVKGYCIDVFEAAINLLPYPVPRKYMLYGHGDRNPDYNDLVNQVAQDNFDAAVGDITIVTNRTRIVDFTQPYMASGLVVVVPVKEIKSSPWSFLKPFTAQMWCVTGAFFLFVGAVVWILEHRHNNEFRGRPRKQLVTIFWFSFSTMFFSHRENTVSALGRLVLLIWLFVVLIINSSYTASLTSILTVQQLSSQIEGIDGLISSNQPIGIQDGSFARKYLTDELNIAASRIVTLKNQQDYIDALLRGPKNGGIVAVVDELPYIELLMSNTNCKFRTVGEEFTKSGWGFVFQRDSPLAVDLSTAILQLSENGDLQKIHDKWLLRSECTAVSHDGEEDSNQLSLSSFWGLFLICGIACLLALIAFCIRVFCQFTKFTTEPEEEAGEEIPPPMARPRRPTRTTSFKNLILFADKKEAEIKEKLRKSSKKRRRSHSSEWESSSPIL 938
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0986 938 Gene3D - 587 705 - -
Bisa12g0986 938 Gene3D - 471 586 - -
Bisa12g0986 938 SMART GluR_14 477 819 IPR001320 GO:0015276|GO:0016020
Bisa12g0986 938 Pfam Bacterial extracellular solute-binding proteins, family 3 533 817 IPR001638 -
Bisa12g0986 938 PIRSF IGluLR_plant 2 937 IPR017103 -
Bisa12g0986 938 FunFam Glutamate receptor 713 821 - -
Bisa12g0986 938 FunFam Glutamate receptor 587 717 - -
Bisa12g0986 938 MobiDBLite consensus disorder prediction 914 938 - -
Bisa12g0986 938 Gene3D - 60 404 - -
Bisa12g0986 938 Pfam Ligand-gated ion channel 818 852 IPR001320 GO:0015276|GO:0016020
Bisa12g0986 938 Gene3D - 156 429 - -
Bisa12g0986 938 SUPERFAMILY Periplasmic binding protein-like II 453 819 - -
Bisa12g0986 938 FunFam Glutamate receptor 156 322 - -
Bisa12g0986 938 CDD PBP1_GABAb_receptor_plant 42 432 IPR044440 -
Bisa12g0986 938 CDD GluR_Plant 474 817 - -
Bisa12g0986 938 Gene3D - 708 820 - -
Bisa12g0986 938 FunFam Glutamate receptor 471 587 - -
Bisa12g0986 938 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 54 70 - -
Bisa12g0986 938 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 327 339 - -
Bisa12g0986 938 PRINTS Metabotropic gamma-aminobutyric acid type B receptor signature 114 142 - -
Bisa12g0986 938 PANTHER IONOTROPIC GLUTAMATE RECEPTOR 42 900 IPR015683 -
Bisa12g0986 938 Pfam Receptor family ligand binding region 58 412 IPR001828 -
Bisa12g0986 938 SUPERFAMILY Periplasmic binding protein-like I 36 467 IPR028082 -
Bisa12g0986 938 MobiDBLite consensus disorder prediction 875 896 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0986 Bisa-ChrBisa12 15765588 15770853 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0986 37 785 Ion Channels AT1G05200 69.426 0.0 1128
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0986 12 15765588 15770853 Bisa02g3402 02 84868957 84873309 CCT
Bisa12g0986 12 15765588 15770853 Bisa12g0986 12 15765588 15770853 ECH