Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0972 ATGGACTCCATTTGCCCAATTGACTCGCGGTGTGCCAATGAAATTTCTGCTCTTCTCACTCCTCCGTCACCTCTTCAAGTTCAGGAATATTATGATAAGCTTTTATCTTCACGGAAGTGCAGTAGTATCACAGTCAAGCAGGATGTAAAGTTTGGAAAGGGTGTGTATGCTGCCAGAAACTTCAACGAAGGGGAGCTTGTTCTGAAAGACCAAATGCTTATTGGGGTTCAACACTCTTCCAACAAGATTGACTGTTTTGTCTGTAGCTCCTGCTTTCGTTTTATTGGTTCTGTAGAACTTCAAATTGGTAGGAGGCTTTACTTTCAAGAATTAGGGGCTTCTGAGAGTCATGGTTGTGATTTGAATGGCCTTTCAAACACATCAAAATACAACTATGAAATAGATTCATCTGATGGAGAAGATAATCAGGAGAGCACTGGAGTGTGTACTTCTGGTAGTTCTGAAGCTAAAATTCATCTCCCTGAAGGTGTTGTTCAATCATTAATGAATGGCCATATGAGGCTGCCTTACTCAGAGGAGTTCTGCTTGCCACCTGCTGTTCCGTGCCCCGGTCGGTGTGGAGAGGCTTACTACTGCAGCACATCATGTGCAGACGCTGATTGGAAGTCCTCTCATTCTTTACTTTGTACGGGTGAGAGGTCTGATACAGCACGTAGGGAGGCGCTTCTAAAATTTGTCAAGCATGCTAATGGTAAAATTCTTGTACTATCAACATCAAAAACAAATGATATATTCCTCCTTGCGGCAAAGGCTATTTCTTCCACCATAGTAAAGTACCACGAATTAAAAGTGAAACCTCTTGTAGAGGAAGGGAAACATGATACGTTATGTGTTTCAAACCACTGTGATCTCTCCATTCTTTTGGATGTCTGGAGGCCTATATCAATGGGACACAAGAGAAGGTGGTGGGACTGCATTGCATTGCCAGACGATATTGATTCTTCTGATGAAGCTGCGTTCAGGATGCAAATAAGAGATCTGGCATTTGAGTCACTACAACTTCTTAAGACAGCTATATTTGACAAGGAGTGTGAGCCATTATTCTCCCTTGAAATATATGGACATATCATTGGCATGTTTGAGCAAAATAATCTTGATTTGGTAGTTGCTTCTCCCGTAGAGGATTACTTTTTATACATTGACAATCTAACATATCCTGAAAAGGAAGAAGCTGAGAAAATTACACAACCAATTCTGGATGCCCTTGGTGAAGACTATTCCATTTGTTGCCAGGGAACTGCTTTTTTTCCTTTGCAGAGCTGCATGAACCATTCCTGTCGTCCTAATGCCAAGGCTTTCAAAAGGGAGGAGGATAGAGATGGCCAAGCAACGCTAATTGCACTGAGGTCCATTTCTAAAGGAGAAGAGATAACCATCTCATATGTTGATGAGGATCTTCCATTTGAAGAGAGACAGGCATCCCTTGCAGATTATGGTTTCAGATGCAGTTGCCCAAAGTGTATTGGAGAACAACCGTAG 1500 0.4207 MDSICPIDSRCANEISALLTPPSPLQVQEYYDKLLSSRKCSSITVKQDVKFGKGVYAARNFNEGELVLKDQMLIGVQHSSNKIDCFVCSSCFRFIGSVELQIGRRLYFQELGASESHGCDLNGLSNTSKYNYEIDSSDGEDNQESTGVCTSGSSEAKIHLPEGVVQSLMNGHMRLPYSEEFCLPPAVPCPGRCGEAYYCSTSCADADWKSSHSLLCTGERSDTARREALLKFVKHANGKILVLSTSKTNDIFLLAAKAISSTIVKYHELKVKPLVEEGKHDTLCVSNHCDLSILLDVWRPISMGHKRRWWDCIALPDDIDSSDEAAFRMQIRDLAFESLQLLKTAIFDKECEPLFSLEIYGHIIGMFEQNNLDLVVASPVEDYFLYIDNLTYPEKEEAEKITQPILDALGEDYSICCQGTAFFPLQSCMNHSCRPNAKAFKREEDRDGQATLIALRSISKGEEITISYVDEDLPFEERQASLADYGFRCSCPKCIGEQP 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0972 499 SUPERFAMILY HIT/MYND zinc finger-like 187 217 - -
Bisa12g0972 499 ProSiteProfiles SET domain profile. 41 469 IPR001214 GO:0005515
Bisa12g0972 499 Pfam MYND finger 188 216 IPR002893 -
Bisa12g0972 499 Gene3D SET domain 390 498 IPR046341 -
Bisa12g0972 499 CDD SET_SMYD 408 494 - -
Bisa12g0972 499 SMART set_7 41 475 IPR001214 GO:0005515
Bisa12g0972 499 SUPERFAMILY SET domain 43 492 IPR046341 -
Bisa12g0972 499 Gene3D - 134 221 - -
Bisa12g0972 499 PANTHER HISTONE-LYSINE N-METHYLTRANSFERASE ATXR2 13 498 IPR044237 GO:0008168
Bisa12g0972 499 Pfam SET domain 52 468 IPR001214 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Bisa12g0972 SET 2.6e-13 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0972 12 15606136 15615261 Bisa12g0972 12 15606136 15615261 ECH