Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0968 ATGGATCCTCTATGTGAGTTTTGTGCAGTATTAAGAGCTGTGGTGTACTGCAAATCGGATTCTGCACGTCTCTGCTTGAATTGCGATGGAAGTGTACACGCCGCCAACTCTTTGTCACGCAGGCATCCTCGTTCACTCATATGTGACAAATGCTATTGCCAGCCAGCGATTGTCCACTGCATGGATGATAAAATGTCTGTGTGTCAAGATTGTGACTGTAATCAAAATGGCTGTTCGGGGTTGGGACATAGGCGTATGGCGTTGCATTGTTACACAGGTTGTCCATCTTTCTCTGAGATGTCTGGGATATGGTCCTTTGTTCTTGAGCCTGCTTCTTCCTCTTCTGGTGGTTTAGATAATAATGGTTGGGGATCTATAAATACTTTGCCTAAAAATGGCAGCAAGTGTTTGGAGCAGCCAGATAATATTAATACTGATGCTTCTTTTAGTAGCAAGCTGAATGAAATAGAATCTTCTGCTAAGTATGAACCTTGGATGGCTCAATCTTCTGTCCTTCAACCAAATCCAGCTTTCATGCCCCAAGGCAGGGATCAACCAGTTTTCTTTCCTCAAGACTCTAACCTGCCAAAGGGATGTCCCAATTCCAAGGATCTTGGGATACACGATGGTGATGGTCTCTGTGAAGGTCTCAATATAGACATTGTTCAGTTGGACTTTGAGAGTGGGAATGAAATATTTGATTGTTCTCAAGGTGGCACCAGTTACCAGCTTGAGGATGGAGGATTAGATTGTCTGTTAATGGAAAAAAGCATATCAGTGACAGAATCTAATGGCCTTATTCAGAATGCCATGGAGGCATCATCAGCTGTCCAGCAAGATTGTGTGGGTTTTCAATCATTCAGGGGTGGTGGGTCAGTTAATGTGATGCAGGCAATGAACAGGACTGCAAACTCTGTACTTATGAATCCTAGCTGTAACCGAAACATGAATCTGGGATTTCCTCAGGGTCAGATACATTCAAGCATACCACTTTCATTACCCTCCATCAATGGTGAAAGTAGCACTACCACTACTGAATTTCAAGATTGTGGGTTATCTCCAGCATTATTGACAGTTGATACACCGTGGGAATCAAATTTGGAGTCTACATGCCCACAAGCTAGGGATAAAGCTAAAATGAGATATAATGAGAAAAAGAAGACTCGAACGTTTGGTAAACAAATAAGGTATGCATCTCGCAAAGCAAGAGCTGATACTAGGAAACGAGTGAAAGGTAGATTTGTGAAAGCAGGAGAAGCATATGATTATGATCCTCTTGTGACAGGGAACTACTAA 1296 0.4252 MDPLCEFCAVLRAVVYCKSDSARLCLNCDGSVHAANSLSRRHPRSLICDKCYCQPAIVHCMDDKMSVCQDCDCNQNGCSGLGHRRMALHCYTGCPSFSEMSGIWSFVLEPASSSSGGLDNNGWGSINTLPKNGSKCLEQPDNINTDASFSSKLNEIESSAKYEPWMAQSSVLQPNPAFMPQGRDQPVFFPQDSNLPKGCPNSKDLGIHDGDGLCEGLNIDIVQLDFESGNEIFDCSQGGTSYQLEDGGLDCLLMEKSISVTESNGLIQNAMEASSAVQQDCVGFQSFRGGGSVNVMQAMNRTANSVLMNPSCNRNMNLGFPQGQIHSSIPLSLPSINGESSTTTTEFQDCGLSPALLTVDTPWESNLESTCPQARDKAKMRYNEKKKTRTFGKQIRYASRKARADTRKRVKGRFVKAGEAYDYDPLVTGNY 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0968 431 ProSiteProfiles Zinc finger B-box type profile. 1 47 IPR000315 GO:0008270
Bisa12g0968 431 ProSiteProfiles CCT domain profile. 375 417 IPR010402 GO:0005515
Bisa12g0968 431 Pfam CCT motif 375 417 IPR010402 GO:0005515
Bisa12g0968 431 SMART bboxneu5 1 47 IPR000315 GO:0008270
Bisa12g0968 431 CDD Bbox1_BBX-like 4 47 - -
Bisa12g0968 431 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 4 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0968 Bisa-ChrBisa12 15560899 15562878 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0968 1 425 C2C2-CO-like Transcription Factor Family AT3G21880 40.421 9.61e-95 288
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa12g0968 CCT 1.4e-16 CL0281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0968 12 15560899 15562878 Bisa12g0968 12 15560899 15562878 ECH