Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0954 ATGACAAGACCCGGCTATGCGGTTTTTTATGTCATTCTCCTTTGCGCGTTGGCTAAAGGAAGCTCCGAGGGCACGACGTGGAACCAGCTTGAGTTTCTCAATGATTGGGGTGCTTTTTCATCGTCTTTTATGATAGACGGAAAAAAGGTAGAGCAGGCTTGGAAACATTGTAGGAAAGAACTGACAGAGAGGAACAATGGTGTCGAAGATTTTGAATTTCATCCAGTGGAAGGAAGCAGTGAATTGAGGTGTTCACTTCTGTTAAAAGAGAACATACAGAAAGCAACTGAGTTTCTGCCTCTTCAGGCCAAACAAAACCTTTTGGATTGCATGAGAGCCAAAACTTCCAATAGTTTTGTTTCTGAAGAGAAGACAAGCTCTAGGCCTTTATTGACCAAGTATTGGACTACTGGTCGTGCAAGGAATTTGCTTGCTAAGTCACCAGATGACAATACACCACCAACCACTGCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCTTCTCCATCTCCATTTTCATCTCCATCTCCTGAGCCTGATCCTGCAGAAGCATCACCAAGTAAGGATAAAAAATCGGATAAAAAACCTGATAATAAACCAGATAAAAAACCGACTAGTTCTGCTTCTCCTCAACTTCCCTCATCCAACCCTTTAGTGAACGCTCCTCCACTTCCTGATAAACATGAGAAGTATGAGGGGCCAAACATCATTTTGATTTCTGTTGTAGCTGTTTGTGGAATCTTGGCATTCATAGTAATCTGCACCTGCTTTTGCAAGCGAAGGAGCAACAAAGTTGACTCAAAAGGGTCACAAATATATGGCAGCCCTTTACTCACAGTAGCCTCGACTGATGTTTTAGCTCCTTCAGCTTCACAGAAGTTTGTTGGTTTGAAAAACTCTGATAAGAAAGAGTCTAGTACTACTACTAGTGTCAGCAATCTGCCTGAAAAGCCTGAAGATAGTTCAGTGGCTGAGACAATACCATCTACAGGACAAATACCAGCTCCTCCTCTACAACCTCCTCCAGCAGAACCGGTTCCTCCACCCCCTGAACCACCACCACCACCTCCAAGAGCCAAGGCTCCACCCGCTCCTCCGAAACCACTGCATGGTAAAAATAAAAGTAGTGAACAGGCAATTCCAAGTGAGGGTGGCGAGTCTGGTGCTCCTAAACCTAAATTAAAGCCATTTTTCTGGGATAAAGTTAATGCAAAAGGAGATCAAGGAAAGGTCTGGCAACAGATCAATGCAGGGTCATTCCAGTTCAATGAGGAAATGATAGAGTCTTTATTTGGCTGTGCCAACCCAAACAAAAATGATGATAAGAAAGGGACGTCTCTTGAACCTGCAGTTCAGTACATTCAGGTTATCGACCCTAGAAAAGCTCAGAATCTGTCAATTCTTTTACGAGCATTGAATGTGACAACGGAAGAAGTTGTTGATGCCCTTAATGAAGGAAATGAGATTCCCACTGAAATAATTCACGCATTATTGAGGATGGCACCAACAGCAGATGAAGAATTAAAGCTTAGGTTATTCACAGGCGACCTTAATCAACTTGGCCCTGCAGAGAGATTTCTCAAGATTTTGGTTGAAATTCCATTTGCTTTCAAACGTCTTGAATCTTTGATGTTCATGAATACCCTTTCAGAAGAGTTCTCGAGCCTTAAGGATTCCTTTGGGACACTAGAGGTTGCTAGCAACAAGCTCAGAAAAAGCAGGCTATTCCTAAAACTATTAGAAGCAGTTCTGAAAACTGGCAACAGGATGAATGACGGTACTTATCGTGGTGGTGCTCAAGCATTTAAGCTCGACACACTCTTGAAACTGTCTGATGTAAAAGGAACTGATGGCAAAACAACTCTATTACACTTCGTGGTTCAGGAGATTATACGTTCTGAGGGCATTAGAGCTGTACGTTCACAGAAAGATAGCCAGCCGAGCATATCTAGTGTGAAAACAGATGATTTTGTTGATGACGGCAATCAAGAGTCATTAGCAGAGCATTATCGGAGCCTTGGCCTTCAGGTGGTTTCAGGTTTAAGTGAGGAACTAGGAGATGTCAAAAATGCAGCAGTCATAGATGGTGAAGGGCTAACAGCTTCAGTTGCAAAACTTGGCCACTCATTGATGAAGTGTAAGGAATTCCTCGATGACGAGATGAAGAATCTCGACGAAGACAGCGAATTCCATCGTTCCCTGAAAATTTTTGTGGAGAAAGCAGAGGGAGATGTGGCATGGCTGTTGGAGGAAGAGAAGAGGATAATGACTCTGGTAAAGAGTACAGCTGATTATTTCCACGGGCAAGCAGGAAAAGACGAAGGACTACGTTTATTCGTGGTTGTACGAGATTTCTTGATAATGTTGGACAAGGCATGCAAAGAGGTTCAAGCCACAACCATTAAATCAGCAAAGGTTGCCAAAAAAGAGAGTCCAAGCGTGTCATCTTCTCAAGACAGTCCAAGCTTCTCATCTTCTCAAGAGACTCCAACTGTGCCATCTCCTCAAGGGACTCCACAGTCAATTGAAGCTTGTATGCATAGGCGACTATTTCCAGCAATCGCAGGGCGGCGCGTGGAGTTCTCTGATTCTGACGATGACGGCGAGTGCTCGTCGCCAAAGTCATCTTAA 2646 0.4373 MTRPGYAVFYVILLCALAKGSSEGTTWNQLEFLNDWGAFSSSFMIDGKKVEQAWKHCRKELTERNNGVEDFEFHPVEGSSELRCSLLLKENIQKATEFLPLQAKQNLLDCMRAKTSNSFVSEEKTSSRPLLTKYWTTGRARNLLAKSPDDNTPPTTAPSPSPSPSPSPSPSPSPSPFSSPSPEPDPAEASPSKDKKSDKKPDNKPDKKPTSSASPQLPSSNPLVNAPPLPDKHEKYEGPNIILISVVAVCGILAFIVICTCFCKRRSNKVDSKGSQIYGSPLLTVASTDVLAPSASQKFVGLKNSDKKESSTTTSVSNLPEKPEDSSVAETIPSTGQIPAPPLQPPPAEPVPPPPEPPPPPPRAKAPPAPPKPLHGKNKSSEQAIPSEGGESGAPKPKLKPFFWDKVNAKGDQGKVWQQINAGSFQFNEEMIESLFGCANPNKNDDKKGTSLEPAVQYIQVIDPRKAQNLSILLRALNVTTEEVVDALNEGNEIPTEIIHALLRMAPTADEELKLRLFTGDLNQLGPAERFLKILVEIPFAFKRLESLMFMNTLSEEFSSLKDSFGTLEVASNKLRKSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIIRSEGIRAVRSQKDSQPSISSVKTDDFVDDGNQESLAEHYRSLGLQVVSGLSEELGDVKNAAVIDGEGLTASVAKLGHSLMKCKEFLDDEMKNLDEDSEFHRSLKIFVEKAEGDVAWLLEEEKRIMTLVKSTADYFHGQAGKDEGLRLFVVVRDFLIMLDKACKEVQATTIKSAKVAKKESPSVSSSQDSPSFSSSQETPTVPSPQGTPQSIEACMHRRLFPAIAGRRVEFSDSDDDGECSSPKSS 881
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0954 881 MobiDBLite consensus disorder prediction 862 881 - -
Bisa12g0954 881 ProSiteProfiles Formin homology-2 (FH2) domain profile. 389 820 IPR015425 -
Bisa12g0954 881 SMART it6_source 389 809 IPR015425 -
Bisa12g0954 881 MobiDBLite consensus disorder prediction 300 334 - -
Bisa12g0954 881 Pfam Formin Homology 2 Domain 392 794 IPR015425 -
Bisa12g0954 881 PANTHER FORMIN-RELATED 227 831 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bisa12g0954 881 MobiDBLite consensus disorder prediction 809 846 - -
Bisa12g0954 881 MobiDBLite consensus disorder prediction 188 207 - -
Bisa12g0954 881 MobiDBLite consensus disorder prediction 142 231 - -
Bisa12g0954 881 MobiDBLite consensus disorder prediction 153 187 - -
Bisa12g0954 881 SUPERFAMILY Formin homology 2 domain (FH2 domain) 352 813 - -
Bisa12g0954 881 PRINTS Proline rich extensin signature 152 164 - -
Bisa12g0954 881 PRINTS Proline rich extensin signature 334 359 - -
Bisa12g0954 881 PRINTS Proline rich extensin signature 197 218 - -
Bisa12g0954 881 PRINTS Proline rich extensin signature 168 184 - -
Bisa12g0954 881 Gene3D Formin, FH2 domain 395 825 IPR042201 -
Bisa12g0954 881 MobiDBLite consensus disorder prediction 864 881 - -
Bisa12g0954 881 MobiDBLite consensus disorder prediction 809 848 - -
Bisa12g0954 881 MobiDBLite consensus disorder prediction 338 374 - -
Bisa12g0954 881 MobiDBLite consensus disorder prediction 300 401 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0954 Bisa-ChrBisa12 15442745 15446799 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0954 390 806 FH2 protein (formin) Gene Family AT3G05470 47.494 5.48e-117 375