Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0950 ATGGAGAATAATTTTCAGTCTAGCTACTCCGGCCCAGGCGCCGGCGACGACTCCTCCTCTTCCTTCGATCCAATGTTCTCCGGTGTCAGCCTTCAGTCGATTCTCAGCCTCAACCCCTCTGTGTTTTCTGATTGCTCCGCTACTGGGCTTCCTGCTAGTCTCGCCTTCCTAGCTGATGAAGTCACTCAGAGCTCTAACATTGAGGACCACATGGCAGAGACAAAAGAGAAGAAGCCGCCTATGGTGGTGCCCAAATCTGAGCCCTGTCTCTTCGAAGACGTCGCGACCTCTGGGACCACTTCTCAATCTCACCCTTTCGACTTCTTCTCCAATAACGGCCCTTCCAACTTCTACGATACGTCACCATTCCACCTTCTCCCTCAACTCCATTCCATGGAGTCCCTGTCCTTCTCTCAGAAACGTCGTCGTTTCGACTCCCTCGTTTCGACTCCCCACACAATGGAGGCGCCATCGCCCGCGCAGGCTCAGGGCAATCTTCACCGTGCCACCGTCAACGACAACCTCTTCGCCGTCGCGCCGCTATATAACAGCAAACCGTCTTCTTCTTCGGCGGATGGTCCGGTTACTGCGAAATCCTCTCCGGTGATCCCTCAGAGCAACCTGGCGCGTCAGCGGCGGCAGAAGCTGAGCGACAAGACGCGGTGCTTGCAGAAACTGATGCCATGGGACAAGAAGATGGACCAAGCCACGCTTCTGGAGGAAGCCTACAAATACGTAAAATTTCTGCAGGCTCAGTTCAATGCTCTCCAATCCATGCCCTCCGATTCGCCTCCTTTCCCGTCCCACCACGGCAATCCCCATCGCGCCCTTCAAAGCGACAACGTATATGGCGATTTGGAGAGGCTGAATCGCAACCAGGTGTTGCAGGTGCTGGTGAACTCCCCTGTGGCTCAAACCATGCTTTACTCACAAGGCTACTGTGTGTTCTCTGTCGAACAGTTAACTCTGCTTAACAACATTTCAGGGAGGAAGCTTCTTCTACAGCAGATGATGTCTGATAATGCTTCTTCAAAAGCTTTCTTCGATTAA 1050 0.5324 MENNFQSSYSGPGAGDDSSSSFDPMFSGVSLQSILSLNPSVFSDCSATGLPASLAFLADEVTQSSNIEDHMAETKEKKPPMVVPKSEPCLFEDVATSGTTSQSHPFDFFSNNGPSNFYDTSPFHLLPQLHSMESLSFSQKRRRFDSLVSTPHTMEAPSPAQAQGNLHRATVNDNLFAVAPLYNSKPSSSSADGPVTAKSSPVIPQSNLARQRRQKLSDKTRCLQKLMPWDKKMDQATLLEEAYKYVKFLQAQFNALQSMPSDSPPFPSHHGNPHRALQSDNVYGDLERLNRNQVLQVLVNSPVAQTMLYSQGYCVFSVEQLTLLNNISGRKLLLQQMMSDNASSKAFFD 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0950 349 MobiDBLite consensus disorder prediction 1 21 - -
Bisa12g0950 349 Pfam Helix-loop-helix DNA-binding domain 210 250 IPR011598 GO:0046983
Bisa12g0950 349 MobiDBLite consensus disorder prediction 187 211 - -
Bisa12g0950 349 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 205 259 IPR036638 GO:0046983
Bisa12g0950 349 MobiDBLite consensus disorder prediction 187 217 - -
Bisa12g0950 349 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 200 249 IPR011598 GO:0046983
Bisa12g0950 349 SMART finulus 206 255 IPR011598 GO:0046983
Bisa12g0950 349 Gene3D - 204 262 IPR036638 GO:0046983
Bisa12g0950 349 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 67 326 IPR045843 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0950 Bisa-ChrBisa12 15408104 15409153 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0950 212 328 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G22100 45.299 4.12e-25 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa12g0950 HLH 0.00029 No_clan