Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0942 ATGCACAAAATAGAGAAAACTCAAGCCAAACGGGATGGATCTAAGTCCCTGGCTGAGACACTGGCAAGATGGAAGGAATACAATGCCCAGCTTGATTCTTGCCACGATGCAGATAAGCCGATTCGGAAAGTCCCTGCCAAAGGATCAAAAAAGGGATGTATGAAGGGCAAAGGAGGGCCCGAGAACTCGCGCTGCAACTACAGAGGTGTAAGGCAAAGGACATGGGGCAAGTGGGTTGCTGAGATTCGAGAACCAAACAGGGGAAGTAGGCTATGGTTGGGTACGTTTGCTACTGCAATAACAGCTGCTTTTGCATATGATGAAGCAGCAAGAGCAATGTATGGTTCATGTGCCCGCCTCAACTTTCCCAAATTCTCAGATTCCAATTTTTCAAATGAATCTTTGAGAGATTCACCTGCTGCACATCAATCTGGCTCTGCAATGTCAACATCAGCGCATGCCGAGTCTGTGAAATCCTCAAGCAACTCGGGGATCGGTGTAGTAGAGGATACTGACAACAAACCTGTTTCCTTTAAAACTTGA 543 0.4678 MHKIEKTQAKRDGSKSLAETLARWKEYNAQLDSCHDADKPIRKVPAKGSKKGCMKGKGGPENSRCNYRGVRQRTWGKWVAEIREPNRGSRLWLGTFATAITAAFAYDEAARAMYGSCARLNFPKFSDSNFSNESLRDSPAAHQSGSAMSTSAHAESVKSSSNSGIGVVEDTDNKPVSFKT 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0942 180 MobiDBLite consensus disorder prediction 38 61 - -
Bisa12g0942 180 MobiDBLite consensus disorder prediction 131 180 - -
Bisa12g0942 180 FunFam Ethylene-responsive transcription factor 2 65 124 - -
Bisa12g0942 180 PRINTS Ethylene responsive element binding protein signature 89 105 IPR001471 GO:0003700|GO:0006355
Bisa12g0942 180 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Bisa12g0942 180 Gene3D AP2/ERF domain 66 124 IPR036955 GO:0003700|GO:0006355
Bisa12g0942 180 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 2 159 - -
Bisa12g0942 180 SMART rav1_2 66 129 IPR001471 GO:0003700|GO:0006355
Bisa12g0942 180 ProSiteProfiles AP2/ERF domain profile. 66 123 IPR001471 GO:0003700|GO:0006355
Bisa12g0942 180 Pfam AP2 domain 65 115 IPR001471 GO:0003700|GO:0006355
Bisa12g0942 180 CDD AP2 65 123 IPR001471 GO:0003700|GO:0006355
Bisa12g0942 180 MobiDBLite consensus disorder prediction 131 168 - -
Bisa12g0942 180 SUPERFAMILY DNA-binding domain 66 123 IPR016177 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0942 Bisa-ChrBisa12 15252125 15252667 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0942 10 172 AP2-EREBP Transcription Factor Family AT2G40340 52.353 5.84e-52 167
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Bisa12g0942 AP2 6.2e-13 CL0081