Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0936 ATGAAGTACTGTGAGCTTTGCAAGGTTCCGGCGAGGACCTACTGCGAGTCCGACCAGGCAAGCTTGTGCTGGGACTGCGACGCTAAGGTCCACGGAGCTAACTTCCTGGTAGCCAGGCACTCCAGGACTCTTCTATGCCATTCGTGTCAATCTCTCACTCCATGGAAAGCCTCCGGTGCTAAGCTCGGAAACACTGTTTCTCTCTGCGAGAGTTGTGCCGGCGGAATGAAGGTTGTCGCTGAAGAAGGGGACGAGAGCGAAGTTGGCAATGACGACGACATGGACACAGAGGAAGATCTCGATGATGATCTCGACGACGATGACGATGACGATGACGGCAGCGACGTTGGCGGTGACGAGGACGGAGATAATCAGGTAGTTCCCTTGTCCTCAGCTCCGCCTCCGCCTCCGCCGGCTTCAGATTCTTCGAGTAGCGAAGAGTCCCTTAGCGGGTGTAATAGCAGCAACAGAGATATTTCTGAGACAGTATCTGCAATTTCATTGAAACGTAGGCGTGAGGATGCTTCGGATCACAATTACCAGGACAGTTCGAAGTGTTCGCGAACTCAACAACGGAGCAACGATGCGGAGTTGAGGATGCAGGTCGCTTCGTTAGCGTGTGAGGGCGGAGGAGGAACGTCGACGGAATCGCCGAGACCCTTGAAAGGCGCAGAAGCCGGACAGGCGTTCCATTCAACGTCGTTGAACAAGTCTCTGGGTAGATTGAACGGTCTACAAAGTTCCGGTGATGGCAAAACACCGAAAGTCTGA 771 0.5396 MKYCELCKVPARTYCESDQASLCWDCDAKVHGANFLVARHSRTLLCHSCQSLTPWKASGAKLGNTVSLCESCAGGMKVVAEEGDESEVGNDDDMDTEEDLDDDLDDDDDDDDGSDVGGDEDGDNQVVPLSSAPPPPPPASDSSSSEESLSGCNSSNRDISETVSAISLKRRREDASDHNYQDSSKCSRTQQRSNDAELRMQVASLACEGGGGTSTESPRPLKGAEAGQAFHSTSLNKSLGRLNGLQSSGDGKTPKV 256
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0936 256 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 3 195 - -
Bisa12g0936 256 MobiDBLite consensus disorder prediction 182 198 - -
Bisa12g0936 256 ProSiteProfiles Zinc finger B-box type profile. 1 45 IPR000315 GO:0008270
Bisa12g0936 256 CDD Bbox1_BBX-like 4 45 - -
Bisa12g0936 256 MobiDBLite consensus disorder prediction 142 163 - -
Bisa12g0936 256 MobiDBLite consensus disorder prediction 80 230 - -
Bisa12g0936 256 MobiDBLite consensus disorder prediction 164 181 - -
Bisa12g0936 256 SMART bboxneu5 1 45 IPR000315 GO:0008270
Bisa12g0936 256 MobiDBLite consensus disorder prediction 85 119 - -
Bisa12g0936 256 MobiDBLite consensus disorder prediction 237 256 - -
Bisa12g0936 256 Pfam B-box zinc finger 2 42 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0936 Bisa-ChrBisa12 15196374 15197294 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0936 2 100 C2C2-CO-like Transcription Factor Family AT5G54470 61.616 6.71e-36 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bisa12g0936 zf-B_box 2.6e-06 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa12g0936 12 15196374 15197294 Bisa02g3353 02 83853932 83854659 CCT
Bisa12g0936 12 15196374 15197294 Bisa12g0936 12 15196374 15197294 ECH