Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0928 ATGGACAACATGAAGACACCATGGATATGGCTCTCTGTTCTCGTCATCTGCTTCTCTTTTCAGTCCCACGCCCCTCTTGCAGCTCTCACCGCCATCTCTGCAAATCAGTCTCTTTCCGGCGATCAAACTCTTCTCTCTGAAGGTGGGGTTTTTGAATTGGGATTCTTCAATACAGGTAATTCCTCCAAATACTACATAGGCATCTGGTACAAAAAGGTCTCTAAGAGGACCTACGTTTGGGTGGCAAACAGAGACAAACCACTCTCTGATAAAAATTCTGCCAAGTTAGCAATTTCGGATGGTAAATTAGTTCTCTTTGACGGGTCTCAAACGGCCGTTTGGTCAACAAACCTGAGTTCTCCCAGCTCAAGTGTTTCAGAAGCTGTGCTTCTGAATAGTGGAAATCTAGTTTTAAGAGATAGGCCTAATGCAACAGAGTATCTATGGCAGAGCTTTGATAATCCAACTGATACATGGCTTCCGGGAGGTAAAATTAAATTGAACAATAAAACAAGACAGCCCCAATATCTCACTTCATGGAAGAATAGCGAGGATCCTGCTGAAGGCCTCTTCTCTCTAGAACTAGACCCAAAAGGAACCAAATCTTATTTAATACTTTGGAATAAGTCTACACAGTACTGGTCAAGTGGTGCTTGGAATGGACAGATCTTCAGCGGGGTCCCTGAAATGAGGTTAAATTATATCTATAATTTCACATTTGTGTCCAACGAGAACGAGAGCTACTTCACCTACACTGTTTATAATAGTTCTATTATATCTCGCTTCGTGATGGATACCTCCGGGCAGATCAAGCAATTGACATGGTTGGAAAGTAGCCAGCAATGGAATCTCTTCTGGTCACAGCCAAGACAACAATGTGAGGTTTATTCTTTCTGTGGTGCATTTGGACAATGCACTGATACTTCCCAACCATCCTGTAGTTGTTTGCCTGGGTTTACGCCTAAGTTACCAACTGATTGGAATCTGAGCGATTACTCAGGTGGGTGTGTGAGGAACACAAAGCTACAGTGTGAGAGTTCTGATCCTTCCAAAGGGAAGAAGGATAGGTTTCGATCAATGGTCAATATGAACTTACCTGACCATGCTCAATCTGTGGAAGCAGGGAATGCAGGGGCATGTGAGTTAGCTTGCTTGAACAATTGCTCATGTGCAGCTTATGCATATGATAGTAATGGGTGTTCAACTTGGCACGGTGATCTCTTGAATCTGCAACAACTTTCTCAAGATGATAGTAGTGGAAAGACTCTATATCTCAAGCTCGCAGCTTCTGAGTTTCCTGATACTAAAAACAGTAAGGGGATGATTATTGGTATTGTTGCTGGCTCAGCTGGTGGTGTAGGTGCCCTGTTGGCCATTCTTCTGTTTGTGATCTACAGGAGAAGAAAGAGAATTGGAACAGGAAAATCAGTGGAGGGTTCATTGATGGCGTTTGGGTATAGAGATCTGCAAAATGCAACAAAGAATTTCTCAGAGAAATTGGGAGGAGGAGGTTTTGGTTCTGTATTCAAAGGAACACTCCCAGATTCCGGTGTCATAGCAGTGAAGAAGCTTGAAAGCATTAGCCAAGGAGAGAAGCAGTTCAGAACAGAAGTGAGTACAATAGGGACAATCCAACATGTTAATCTTGTTCGGCTACGAGGGTTCTGTTCTGAAGGAAACAGAAAACTGTTGGTTTATGATTACATGCCAAATAGCTCTTTAAATTCCCATCTCTTTCAGGAAAAGAACTCTAAGGTATTGGACTGGAAGATGAGATACCAAATTGCTCTTGGAACAGCAAGAGGACTAACTTACCTGCATGAGAAGTGTAGAGACTGTATCATACACTGTGACATTAAGCCAGAGAACATTCTCTTGGATGCTGATTTTTGTCCAAAAGTCGCTGACTTTGGCCTCGCGAAGCTCGTTGGACGGGATTTCAGTAGAGTTCTGACAACCATGAGAGGAACAAGAGGTTATCTTGCTCCAGAGTGGATCTCTGGGGTGGCTGTCACAGCCAAAGCTGATGTCTACAGCTATGGAATGATGCTTTTTGAGTTTGTATCAGGAAGGAGGAACGCAGAGCCATCTGAAGATGGCAGAGTCAAGTTCTTTCCAACTTTTGCTGCAAATGTGGTAACCGAAGGAGGCAATGTGCTTAGCCTTTTAGACCCAAGGTTGGAGGGAAATGCAGACATTGATGAGGTGACTCGTATCATAAAAGTTGCTTCCTGGTGTGTCCAAGATGATGAAACTCACAGGCCAAGCATGGGTCAGGTTGTTCAAATACTTGAGGGGATTTTGGATGTGAATCCGCCTCCAGTTCCGAGATCTCTCCAGCTGTTTGTTGAAGACCAGGAGAACATAGTGTTCTTCACTGACTCTTCAAGCTCCAACCAGAGCTCACAGGTAAGAAGCAATGTTTCAACTTCAACAGCCTCCTCTCAAGCACAAAGCAACGTCGCATCTGCTACGCCCAACTCTTCAAGAACAAATTAA 2499 0.4366 MDNMKTPWIWLSVLVICFSFQSHAPLAALTAISANQSLSGDQTLLSEGGVFELGFFNTGNSSKYYIGIWYKKVSKRTYVWVANRDKPLSDKNSAKLAISDGKLVLFDGSQTAVWSTNLSSPSSSVSEAVLLNSGNLVLRDRPNATEYLWQSFDNPTDTWLPGGKIKLNNKTRQPQYLTSWKNSEDPAEGLFSLELDPKGTKSYLILWNKSTQYWSSGAWNGQIFSGVPEMRLNYIYNFTFVSNENESYFTYTVYNSSIISRFVMDTSGQIKQLTWLESSQQWNLFWSQPRQQCEVYSFCGAFGQCTDTSQPSCSCLPGFTPKLPTDWNLSDYSGGCVRNTKLQCESSDPSKGKKDRFRSMVNMNLPDHAQSVEAGNAGACELACLNNCSCAAYAYDSNGCSTWHGDLLNLQQLSQDDSSGKTLYLKLAASEFPDTKNSKGMIIGIVAGSAGGVGALLAILLFVIYRRRKRIGTGKSVEGSLMAFGYRDLQNATKNFSEKLGGGGFGSVFKGTLPDSGVIAVKKLESISQGEKQFRTEVSTIGTIQHVNLVRLRGFCSEGNRKLLVYDYMPNSSLNSHLFQEKNSKVLDWKMRYQIALGTARGLTYLHEKCRDCIIHCDIKPENILLDADFCPKVADFGLAKLVGRDFSRVLTTMRGTRGYLAPEWISGVAVTAKADVYSYGMMLFEFVSGRRNAEPSEDGRVKFFPTFAANVVTEGGNVLSLLDPRLEGNADIDEVTRIIKVASWCVQDDETHRPSMGQVVQILEGILDVNPPPVPRSLQLFVEDQENIVFFTDSSSSNQSSQVRSNVSTSTASSQAQSNVASATPNSSRTN 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0928 832 CDD STKc_IRAK 500 767 - -
Bisa12g0928 832 ProSiteProfiles PAN/Apple domain profile. 344 428 IPR003609 -
Bisa12g0928 832 CDD EGF 293 320 - -
Bisa12g0928 832 SMART serkin_6 494 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0928 832 MobiDBLite consensus disorder prediction 794 832 - -
Bisa12g0928 832 ProSiteProfiles Bulb-type lectin domain profile. 29 151 IPR001480 -
Bisa12g0928 832 Gene3D Transferase(Phosphotransferase) domain 1 569 772 - -
Bisa12g0928 832 CDD PAN_AP_plant 340 428 - -
Bisa12g0928 832 Gene3D - 27 152 IPR036426 -
Bisa12g0928 832 SMART blect_4 35 155 IPR001480 -
Bisa12g0928 832 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 220 IPR036426 -
Bisa12g0928 832 SUPERFAMILY Protein kinase-like (PK-like) 479 801 IPR011009 -
Bisa12g0928 832 PANTHER OS07G0415500 PROTEIN 10 776 - -
Bisa12g0928 832 Pfam PAN-like domain 352 409 IPR003609 -
Bisa12g0928 832 Gene3D Phosphorylase Kinase; domain 1 462 568 - -
Bisa12g0928 832 ProSitePatterns Protein kinases ATP-binding region signature. 500 523 IPR017441 GO:0005524
Bisa12g0928 832 FunFam Serine/threonine-protein kinase 24 152 - -
Bisa12g0928 832 ProSiteProfiles Protein kinase domain profile. 494 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0928 832 ProSiteProfiles EGF-like domain profile. 289 325 IPR000742 -
Bisa12g0928 832 CDD B_lectin 35 155 IPR001480 -
Bisa12g0928 832 PIRSF SRK 2 819 IPR024171 GO:0004674
Bisa12g0928 832 Pfam Protein kinase domain 497 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0928 832 FunFam Serine/threonine-protein kinase 461 568 - -
Bisa12g0928 832 Pfam D-mannose binding lectin 77 181 IPR001480 -
Bisa12g0928 832 Pfam S-locus glycoprotein domain 214 322 IPR000858 GO:0048544
Bisa12g0928 832 FunFam Serine/threonine-protein kinase 569 772 - -
Bisa12g0928 832 ProSitePatterns Serine/Threonine protein kinases active-site signature. 614 626 IPR008271 GO:0004672|GO:0006468
Bisa12g0928 832 SMART ntp_6 352 427 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0928 Bisa-ChrBisa12 15152826 15155324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0928 475 774 Receptor kinase-like Gene Family AT5G20050 43.671 8.26e-79 260
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Bisa12g0928 Pkinase 3.3e-47 CL0016