Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0925 ATGGTGAGAACCCCTTCTCGCGACAAAAGTGGACTCAAGAAAGGCACTTGGACGCCCGAGGAAGATAGGAAGCTTATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTTCCCAAGTATGCAGGTCTAGCAAGGTGTGGAAAGAGTTGTAGGCTGAGGTGGCTAAACTACCTGAGGCCAAACATCAGAAGAGGGAACTACACTCCGGAAGAAGAAGACACCATCATCAAGCTGCACCAAAAGTTGGGTAACAGATGGTCAGCGATTGCCGCAGAGCTTCCAGGAAGAACAGACAATGATATAAAGAACTACTGGCACACCAACCTCAAGAAGCGCGTTCAGCTCAACGCACCATTAACACAAGATCAAGAGGGTAGCGGTGAAGCTCAAGTCTCCAACTCCAAGGATGGCTCACAAGTTGAACCAAACCCAAACACTGACCCATGCGATGATCAAAGCCAACAGGCTGCTAGTGCTACAACTCACATGGTGGATTTATGCCCACTGTCTCCTCAATCATCGTGCAGCGAATTCTCGAGTGTAACCACAGACACCAGTGATAATAAGCAGATGAATAGGGTTGGGGAAGATGAGTTTGCTTTTCTGGAAGCATTCGCAGATGGGAATTTCTGGACAGATCCATATGTGGATGACATTTTCTGCGTCCCTAGTGAAACAGTGGCACTCTCACCCTTGCTCAGTCAACCCGACTATTTCACTCCATTGTCTGATCAAGAACTTTGGACTCCAATTAATTTGCCCTCCGATCATTATTATAGTGCCTTACTCTGGTGA 804 0.4739 MVRTPSRDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPKYAGLARCGKSCRLRWLNYLRPNIRRGNYTPEEEDTIIKLHQKLGNRWSAIAAELPGRTDNDIKNYWHTNLKKRVQLNAPLTQDQEGSGEAQVSNSKDGSQVEPNPNTDPCDDQSQQAASATTHMVDLCPLSPQSSCSEFSSVTTDTSDNKQMNRVGEDEFAFLEAFADGNFWTDPYVDDIFCVPSETVALSPLLSQPDYFTPLSDQELWTPINLPSDHYYSALLW 267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0925 267 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa12g0925 267 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa12g0925 267 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Bisa12g0925 267 CDD SANT 69 112 IPR001005 -
Bisa12g0925 267 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa12g0925 267 FunFam MYB-related transcription factor 13 66 - -
Bisa12g0925 267 CDD SANT 16 61 IPR001005 -
Bisa12g0925 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa12g0925 267 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa12g0925 267 MobiDBLite consensus disorder prediction 123 160 - -
Bisa12g0925 267 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa12g0925 267 Gene3D - 6 66 - -
Bisa12g0925 267 SMART sant 13 63 IPR001005 -
Bisa12g0925 267 SMART sant 66 114 IPR001005 -
Bisa12g0925 267 Gene3D - 69 140 - -
Bisa12g0925 267 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0925 Bisa-ChrBisa12 15079749 15080844 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0925 1 143 MYB Transcription Factor Family AT2G31180 61.111 3.88e-59 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa12g0925 Myb_DNA-binding 1.1e-13 CL0123