Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0924 ATGGTGAGAACTCCTTCGTTCGACAAAAGTGGACTCAAAAAAGGAACCTGGACGCCCGAGGAAGACAGGAAGCTTATTGCTTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTTCCCAGGTTTGCAGGTCTGGCCAGGTGTGGGAAGAGTTGTAGACTGCGGTGGATGAATTATCTGAGACCCAACATCAAAAGGGGAAACTACACTCCTGAGGAAGAAGACACTATTGTCAGACTCCACAAAAAGATGGGCAATAGATGGTCTGCGATTGCAGCTCATTTACCAGGAAGAACTGATAACGAAATAAAGAATCACTGGCATACTGCTCTCAAGAAAAGCCTTCAACACCACTCACCAACAGTACTCACAAGTGCAGAAAAGCCTAATGCCCCCCAAAAGTCAAAGGATAATTCCACGTGTCACCCGCCAGAGCCACCCACTTCTGATCAAATCCTGGATTCAAGCGAACTGTCTCCACAATCATCCTCAAGCTGCGTCGCCACTCCATCCCCAGGGAAACAAACCCAGGATGAGAATTCAATTACGGATTATGACTTTGCCTTTCTCGACGATTACACTGCAACAACGCAGCCTGCGAGGCCAGATTTCTGGGCACTCACAAACATGGGTGAAATTTACGATGACGTGTTCTCTGTCGTCCCATGTGATCATCAAACAGATCATCCAATTCACCAAGCTCCAGCTTCGGAGCCAAATAATTTCGTGGATGAATTTTATTTTCCGGATAATTCAGCGATTGAAGATTTCTTGACACACCCATGTGTGCCTGACGTGTCCCACGTGGCAGCCGAATCACAAGCACTAATTGAGAAAAGTTATTTTGAGTTAGAGAACCTTTATCCACCCTATGATGTGGATCTATGGAGTAGGTGA 900 0.4633 MVRTPSFDKSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIKRGNYTPEEEDTIVRLHKKMGNRWSAIAAHLPGRTDNEIKNHWHTALKKSLQHHSPTVLTSAEKPNAPQKSKDNSTCHPPEPPTSDQILDSSELSPQSSSSCVATPSPGKQTQDENSITDYDFAFLDDYTATTQPARPDFWALTNMGEIYDDVFSVVPCDHQTDHPIHQAPASEPNNFVDEFYFPDNSAIEDFLTHPCVPDVSHVAAESQALIEKSYFELENLYPPYDVDLWSR 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0924 299 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bisa12g0924 299 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa12g0924 299 Gene3D - 6 67 - -
Bisa12g0924 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa12g0924 299 CDD SANT 16 61 IPR001005 -
Bisa12g0924 299 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa12g0924 299 CDD SANT 69 110 IPR001005 -
Bisa12g0924 299 MobiDBLite consensus disorder prediction 119 181 - -
Bisa12g0924 299 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa12g0924 299 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa12g0924 299 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 181 - -
Bisa12g0924 299 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa12g0924 299 SMART sant 66 114 IPR001005 -
Bisa12g0924 299 SMART sant 13 63 IPR001005 -
Bisa12g0924 299 FunFam MYB-related transcription factor 13 66 - -
Bisa12g0924 299 Gene3D - 69 142 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0924 Bisa-ChrBisa12 15031935 15033039 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0924 1 118 MYB Transcription Factor Family AT1G06180 70.339 7.96e-57 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa12g0924 Myb_DNA-binding 1.9e-12 CL0123