Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0922 ATGGTGAGAAGTCCTTTCTATGACAAAAATGGAGTGAAGAAAGGCGCGTGGAGCAGAGAAGAGGATGACAAACTCAGACATTTTATTCAGAGATATGGCCATCGCAATTGGCGTCAACTCCCCAAGTTTGCAGGTTTGGCAAGATGTGGAAAAAGTTGCAGACTTCGTTGGATGAATTACCTGAAACCAAATCTAAAACATGGGAACTATTCTCAAGAGGAAGAGGGACTGATCATCAAATTACACCAACAGCTAGGGAACAAGTGGTCTTTGATTGCTAAAGAACTACCGGGACGAACAGACAACGAGGTAAAGAACCATTGGCATAGCCATCTGAAGAAGAAGAAGAATAAGGGCTTGAAGCTCAATCATGACACGAAATCTGAGTCGAAATCGAAGTCAAGTGAGTACACAGAATCTGGAAGCCCAAGTGTGTTTGTTGGGGCTGAGTCTGAGTCTCACCCTATTCTGGAAAGTTCGTTAGTGGCTCAAGATAACTATTCATCCATTACTTCAAGCTCAAATGCTGCAGAAGCAGCCATGAGTATGAAGTGGTCCAGAGAAGAAGACAGTGTTGCTTCCTGGGAAACAAGCAGCGATTTTTGGAGTAGACCATTTATGGTCGAAAATTCATCTACTTATTATGAAATTGCACCAGTTTTTTCATACCCATCTGACTGTTCTGATTTGAGTGACCTTTTAGATTGGTAA 711 0.4219 MVRSPFYDKNGVKKGAWSREEDDKLRHFIQRYGHRNWRQLPKFAGLARCGKSCRLRWMNYLKPNLKHGNYSQEEEGLIIKLHQQLGNKWSLIAKELPGRTDNEVKNHWHSHLKKKKNKGLKLNHDTKSESKSKSSEYTESGSPSVFVGAESESHPILESSLVAQDNYSSITSSSNAAEAAMSMKWSREEDSVASWETSSDFWSRPFMVENSSTYYEIAPVFSYPSDCSDLSDLLDW 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0922 236 Gene3D - 69 140 - -
Bisa12g0922 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa12g0922 236 FunFam Transcription factor RAX3 7 67 - -
Bisa12g0922 236 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa12g0922 236 CDD SANT 16 61 IPR001005 -
Bisa12g0922 236 SMART sant 66 114 IPR001005 -
Bisa12g0922 236 SMART sant 13 63 IPR001005 -
Bisa12g0922 236 Gene3D - 13 66 - -
Bisa12g0922 236 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa12g0922 236 Pfam Myb-like DNA-binding domain 68 112 IPR001005 -
Bisa12g0922 236 CDD SANT 69 111 IPR001005 -
Bisa12g0922 236 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa12g0922 236 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 203 - -
Bisa12g0922 236 MobiDBLite consensus disorder prediction 102 144 - -
Bisa12g0922 236 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa12g0922 236 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0922 Bisa-ChrBisa12 15016488 15017460 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0922 1 214 MYB Transcription Factor Family AT2G31180 42.152 3.16e-56 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa12g0922 Myb_DNA-binding 1.7e-12 CL0123