Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0916 ATGGGAAGAGCACCTTGCTGTGACAAAAATGGACTGAAGAAGGGTCCATGGACACCCGAGGAAGATCTCAACCTCATCAACTACATTCAGACTCATGGACCAGGCAATTGGCGTACCCTCCCCAAAAATGCTGGTCTGCAGAGATGTGGCAAGAGTTGCAGGCTTCGATGGACGAATTATCTGAGACCCGATATCAAGAGAGGGAGATTCTCCTTTGAAGAAGAAGAGGCCATTATTCAGTTGCACAGTGTCTTGGGAAACAAATGGTCGGCTATAGCTGCAAGATTGCCAGGAAGAACAGACAACGAAATAAAGAACTACTGGAACACCCACATCAGGAAGAGGCTGCTTCGGATGGGACTTGATCCAGTTACTCACGCCCCACGACTTGATCTAATTGAAGTATCCTCCATTCTGAGTTCAGTGTTGACCAACCCATCGCTTCTGAATCTGCAAGGCTTACTGGGGGCTCAAGCCTTGATGAACCCGGAATTCTTGAAGCTGGCCTCCACTCTTGTGTCGTTGAAGAACGAAAACCCAGATTTAGTTTCACAGAATCTGCAAGAGATAACCCAAGCTGGGAATCATCAAGCGGAAAGCAGCCAAGTTGACCCATTTAATCAGTTTCAGATGCCGACTGTCTCAGGCAATAATATCACAAACATGAGCTGTTCAAGTTCGCTGGAGAATTCATTTCCTTCCTATCTGTGCGAGAATGGTAATCAGCCTCAAAACCAGGTTGATTTGCAAGGAAACCCAACATTTGGGCGGTGTCTGAACAGTGAAAACATTCAAAGCTTAGGATATGAGTCAGTTCTATCGACGCCGTTGTCAAGTCCAACCCCATTGAATTCATCTCCCACGTATGTGAATAGCAGCGCCGACGAGGACAGAGACAGCCATTGCAGCGATTTATTCAAGTTCGAAATTCCAGAGAGTCTCAGTCTGGACATCAATGAGTTCTTGTAA 969 0.4644 MGRAPCCDKNGLKKGPWTPEEDLNLINYIQTHGPGNWRTLPKNAGLQRCGKSCRLRWTNYLRPDIKRGRFSFEEEEAIIQLHSVLGNKWSAIAARLPGRTDNEIKNYWNTHIRKRLLRMGLDPVTHAPRLDLIEVSSILSSVLTNPSLLNLQGLLGAQALMNPEFLKLASTLVSLKNENPDLVSQNLQEITQAGNHQAESSQVDPFNQFQMPTVSGNNITNMSCSSSLENSFPSYLCENGNQPQNQVDLQGNPTFGRCLNSENIQSLGYESVLSTPLSSPTPLNSSPTYVNSSADEDRDSHCSDLFKFEIPESLSLDINEFL 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0916 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa12g0916 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 250 - -
Bisa12g0916 322 FunFam MYB-related transcription factor 13 66 - -
Bisa12g0916 322 CDD SANT 69 112 IPR001005 -
Bisa12g0916 322 Gene3D - 69 116 - -
Bisa12g0916 322 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa12g0916 322 FunFam Transcription factor MYB39 69 130 - -
Bisa12g0916 322 CDD SANT 16 61 IPR001005 -
Bisa12g0916 322 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Bisa12g0916 322 Gene3D - 13 66 - -
Bisa12g0916 322 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa12g0916 322 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bisa12g0916 322 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa12g0916 322 MobiDBLite consensus disorder prediction 275 293 - -
Bisa12g0916 322 SMART sant 13 63 IPR001005 -
Bisa12g0916 322 SMART sant 66 114 IPR001005 -
Bisa12g0916 322 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa12g0916 322 MobiDBLite consensus disorder prediction 275 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0916 Bisa-ChrBisa12 14944749 14945922 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0916 1 322 MYB Transcription Factor Family AT4G21440 52.355 3.23e-103 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa12g0916 Myb_DNA-binding 4.8e-15 CL0123