Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0884 ATGGGTGGGAAGAGATCTGCTTTAGAGAAGAAGAAATGGAAGATCTATGGACAAGTCTTATTGAGATATATGATGATCTGCACAATTCAGTTTTCCCGTGCAGACACTAATCCCACTGATGTTGCTGCTATCAATGGCTTACATGCTGCTCTGGGCTACCCTATTCTTCCTGGGTGGGTTCCTAGCGGGGGAGATCCATGTGGACAATCATGGCAAGGCGTACAATGTAATGGTTCGAGATCTAAGCAACAATCAGATTGGGGGAAGTTTCTTTCAGATAACCAGTTTGCTGGAAGTATTCCAGCTTCTTTATCGGCATTGACCAAAATGACAGACATAGATCTATCTAGTAATAATTTGAGCGGGGAACTGCCGTCATCTCTAGAGAACTTGTCAACTCTGACCTCCCTAAAAGCTGGAAACCCATTCAATGTTAATGCTACTATAGCTCCAGTTTCTCCACCTCATTCTCCAGGGACAGCACCACCAGGAACTCATGTTTCTGGAGGGCCATCTTCTGGACACATACCAACTAAAGAGGGTGATCAACCAACTGCAAAAGAGGAATCAAATTCTGAAAAATCAAAAAACACCACCAGCAGGGTGATTTGGATATCTATTGCTGGCATATTAGTATTTATTATTTTGGGACTGGGACTTGTTCTCTTTATTCAAAAATGTGGCAGAAGGGAAAGACTTGACAAATTTTCCAAGGAACATAAAACTGTTGCATATGGAGGAGACAAACAGAATCATCAGGATTACAGGGTTTTAGTCCCGCCATATACTCAAACTGAGGAAGCACATAAAGGGGCTGTTCTGAGACCAACAGATCATCAAGCAGAGACCAAGAGAGTGGGGGCTACGCCAAAGTCACAGGATGAACGAGAGAAGCATGAGCTAATAACAGGACAAGTACCAAAGCTGTGGGATCATGAAATAGATATGAGTGCGCTAGATTTATATTCAATGCCTCCACCCCCACCACCACCGCCTCCTCCTCCTCTTGCTGAGAGGGTGATTGTTGAACCAATCACATTCCACAAAGGGACTACTGTCAATCCTTCTGCTAAAAGTCTAGTTTCTACCACTTTTGCAAAATATTTCACCATTGCATCCCTTCAACAGCATACTAACAGCTTTTCTCAAGAAAATCTTATTGGAGGAGGCATGCTGGGAACTGTTTATAGGGCAGAGCTTCCTGATGGGAAGCTACTGGCTGTGAAGAAACTGGACAAGAAAGCTTCTGATCACCAAAAGGATGAGGAGTTTCTTGAATTGGTAAATAGCATTGATAGGATTCGGCATACCAATGTTGTTGAGCTTATTGGATACTGTGCAGAGCATGGTCAAAGGCTTTTGATCTATGAGTACTGTAGTAACAGATCACTGCATGATGCACTACATTCAGATGATGAATTCAAAACAAGTCTCTCATGGAATGCTCGCATTCAGATAGCACTTGGGGCAGCTAGAGCCTTGGAGTATTTGCATGAGATCTGCCAGCCACCTGTTGTACACAGAAATTTCAAATCTGCAAATGTTCTTCTTGATGATGATCTATCAGTGCGTGTATCTGAATGTGGTTTGGCACCATTGGTAGCATCAGGTTCTGTAAGTCAGCTCTCTGGGCACTTACTTGCAGCATATGGCTACGGAGCTCCAGAATTTGATTCTGGAATTTACACATACCAGAGTGATGTTTACAGCTTCGGAGTGGTTATGTTAGAACTATTGACAGGCCGAAAATCCTATGACAAGACACGCGCTCGAGGAGAGCAGTTTTTGGTGAGATGGGCAATACCCCAACTTCATGACATTGATGCCTTATCAAGGATGGTTGATCCTTCTCTCAATGGAGATTACCCAGCTAAATCACTGTCAAACTTTGCCGACATTGTTTCTCGATGTGTTCAGTCAGAGCCAGAGTTTAGACCACCAATGTCAGAGGTTGTCCAGTACTTGTTAGATATGATAAGGAGGGAGTCTCATAGAAGTTGA 2001 0.4328 MGGKRSALEKKKWKIYGQVLLRYMMICTIQFSRADTNPTDVAAINGLHAALGYPILPGWVPSGGDPCGQSWQGVQCNGSRSKQQSDWGKFLSDNQFAGSIPASLSALTKMTDIDLSSNNLSGELPSSLENLSTLTSLKAGNPFNVNATIAPVSPPHSPGTAPPGTHVSGGPSSGHIPTKEGDQPTAKEESNSEKSKNTTSRVIWISIAGILVFIILGLGLVLFIQKCGRRERLDKFSKEHKTVAYGGDKQNHQDYRVLVPPYTQTEEAHKGAVLRPTDHQAETKRVGATPKSQDEREKHELITGQVPKLWDHEIDMSALDLYSMPPPPPPPPPPPLAERVIVEPITFHKGTTVNPSAKSLVSTTFAKYFTIASLQQHTNSFSQENLIGGGMLGTVYRAELPDGKLLAVKKLDKKASDHQKDEEFLELVNSIDRIRHTNVVELIGYCAEHGQRLLIYEYCSNRSLHDALHSDDEFKTSLSWNARIQIALGAARALEYLHEICQPPVVHRNFKSANVLLDDDLSVRVSECGLAPLVASGSVSQLSGHLLAAYGYGAPEFDSGIYTYQSDVYSFGVVMLELLTGRKSYDKTRARGEQFLVRWAIPQLHDIDALSRMVDPSLNGDYPAKSLSNFADIVSRCVQSEPEFRPPMSEVVQYLLDMIRRESHRS 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0884 666 SUPERFAMILY L domain-like 91 140 - -
Bisa12g0884 666 FunFam Protein STRUBBELIG-RECEPTOR FAMILY 8 347 458 - -
Bisa12g0884 666 SUPERFAMILY Formin homology 2 domain (FH2 domain) 325 335 - -
Bisa12g0884 666 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 459 666 - -
Bisa12g0884 666 Pfam Leucine rich repeat N-terminal domain 39 77 IPR013210 -
Bisa12g0884 666 PANTHER OS01G0253100 PROTEIN 297 661 - -
Bisa12g0884 666 ProSiteProfiles Protein kinase domain profile. 381 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa12g0884 666 SUPERFAMILY Protein kinase-like (PK-like) 357 655 IPR011009 -
Bisa12g0884 666 Gene3D Transferase(Phosphotransferase) domain 1 459 666 - -
Bisa12g0884 666 MobiDBLite consensus disorder prediction 181 195 - -
Bisa12g0884 666 MobiDBLite consensus disorder prediction 148 198 - -
Bisa12g0884 666 Pfam Protein tyrosine and serine/threonine kinase 384 655 IPR001245 GO:0004672|GO:0006468
Bisa12g0884 666 Gene3D Phosphorylase Kinase; domain 1 346 458 - -
Bisa12g0884 666 MobiDBLite consensus disorder prediction 277 299 - -
Bisa12g0884 666 Gene3D Ribonuclease Inhibitor 46 188 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0884 Bisa-ChrBisa12 14474475 14481116 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0884 31 666 Strubbelig Receptor Gene Family AT4G03390 51.847 0.0 647
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Bisa12g0884 PK_Tyr_Ser-Thr 8.9e-41 CL0016