Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa12g0870 ATGTTGGGTCAGCTCAAGGAAGATAAAGAACAGGACGAAGATTTGCTCGGTCAAGCTGAGATATGGAAATACATGTGCAGCTTCACCGACTCCGTAGCCCTCAAGTGCGCCGTCGAGCTCCGCATCGCCGATATAATCGACCACCATGGCCAACCCCTGTCCTTGCAGAAGATTCTCGACAACATCGCCGACGCACCCTCTCCTGACATCACCTTCCTCCACCGAATCATGCGAGTGCTCGTCCGCCGGAAGGTCTTCTCCGCCCACCAATCCGATTCCGGCGAAACCCTCTACGGCCCCACTCGTGCCTCCAAGTGGATCCTCCGAGACACCAAGATGACTCTGGCTCCGATGCTGCTATTGGAGAACCACCCCATGCATTTGAACCCCGCTCACTTCATAAGCGATTGCATCAGAGAGGGCACGAAAAACGGCACTGCGTTTTTTAGGTGCCATGGCCACGAGCAGTTTGATTTGACGGGGTTGGACCCTGAGTACAATAGATTGTTCAATGAGGGCATGGTGTGCACTGCGAGGATCGTGTCGAAGGCCGTGATCAACGGGTACAAAGATGGGTTCAACAAGATTCAATCTTTGGTGGACGTGGGAGGTGGGATTGGAGGGTCGCTGTCTGAGATTGTGCGAGCATACCCTCATATTAAAGGTATCAACTTTGATCTGCCCCACGTGGTTAGCACCGCTCCCAAGTACGACGGAATCACCCATGTTGGAGGCGACATGTTCGTGTCCGTTCCCAGTGCTGATGCCATCTACATGAAGTGGATCCTACACGACTGGAGCGACCAGCACTGCATCCAGATACTGAAGAACTGCAGGAAGGCGATACCAGAGAAGACAGGGAAGGTGATAATAGTGGACCACGTGCTGCAACCAGAAGGGAATGGGCTATTCGACGACACAGGGTTTGCATTCGACATGATGCTTCTGGCACACAACGCAGGAGGGAAGGAGAGGACGGAGCAGGACTGGAAGTGGCTCTTCGAACAGACTGGCTTCCCTCGCTACAATATCATCAAGATCAAGGCTCTCCCCTCCATCATCGAGGCCTTCCCTGTCTGA 1080 0.537 MLGQLKEDKEQDEDLLGQAEIWKYMCSFTDSVALKCAVELRIADIIDHHGQPLSLQKILDNIADAPSPDITFLHRIMRVLVRRKVFSAHQSDSGETLYGPTRASKWILRDTKMTLAPMLLLENHPMHLNPAHFISDCIREGTKNGTAFFRCHGHEQFDLTGLDPEYNRLFNEGMVCTARIVSKAVINGYKDGFNKIQSLVDVGGGIGGSLSEIVRAYPHIKGINFDLPHVVSTAPKYDGITHVGGDMFVSVPSADAIYMKWILHDWSDQHCIQILKNCRKAIPEKTGKVIIVDHVLQPEGNGLFDDTGFAFDMMLLAHNAGGKERTEQDWKWLFEQTGFPRYNIIKIKALPSIIEAFPV 359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa12g0870 359 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 22 358 IPR016461 GO:0008168
Bisa12g0870 359 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 113 356 IPR029063 -
Bisa12g0870 359 CDD AdoMet_MTases 199 296 - -
Bisa12g0870 359 PANTHER O-METHYLTRANSFERASE 31 341 IPR016461 GO:0008168
Bisa12g0870 359 SUPERFAMILY "Winged helix" DNA-binding domain 11 110 IPR036390 -
Bisa12g0870 359 FunFam O-methyltransferase family protein 109 357 - -
Bisa12g0870 359 Pfam Dimerisation domain 33 81 IPR012967 GO:0046983
Bisa12g0870 359 Gene3D - 4 107 IPR036388 -
Bisa12g0870 359 PIRSF O-mtase 2 359 IPR016461 GO:0008168
Bisa12g0870 359 Gene3D Vaccinia Virus protein VP39 109 359 IPR029063 -
Bisa12g0870 359 Pfam O-methyltransferase domain 135 339 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa12g0870 Bisa-ChrBisa12 14253626 14256417 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa12g0870 32 345 Monolignol Biosynthesis Gene Families AT5G54160 39.375 3.51e-76 237